Gene Information

Name : PC1_1980 (PC1_1980)
Accession : YP_003017557.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Virulence
Product : UTP-glucose-1-phosphate uridylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1210
EC number : -
Position : 2273628 - 2274539 bp
Length : 912 bp
Strand : +
Note : TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: eca:ECA2329 UTP--glucose-1-phosphate uridylyltransferase subunit GalU

DNA sequence : 
ATGTCTATTGTGAATAAAAAAGTAAAAAAAGCGGTCATACCGGTTGCTGGATTAGGGACGCGTATGCTGCCTGCCACCAA
AGCCATTCCTAAAGAAATGTTGCCGTTGGTAGATAAGCCGCTGATCCAATATGTTGTTAATGAGTGTATCGCTGCAGGGA
TTAATGAAATTATTCTGGTTACACACTCTTCTAAGAATTCTATCGAAAACCATTTCGATACCAGTTTTGAGCTGGAAGCC
ATACTAGAAAAACGCGTTAAACGTCAGCTGTTGGAAGAAGTTCAATCTATCTGTCCTAAACACGTCACCATTATGCAAGT
GCGTCAGGGATTAGCTAAAGGGCTGGGCCATGCCGTATTGTGCGCGCACCCGTTAGTGGGAGATGAACCCGTCGCAGTTA
TTCTGCCGGATGTGATTATTGATGAGTATGCATCCGATCTGAAGAAAGATAACCTGAGCGAAATGTTGCAACGTTTTTCT
ACTACAGGCCACAGCCAGATTATGGTTGAGCCGGTTGAAAATGTAAGCAGCTATGGCGTGGTTGATTGCAAAGGTGTGGA
ATTAAAAGCAGGGGATAGTGCACCTATGGTGGGCGTGGTTGAAAAACCGAAAGCTTCCGAGGCACCGTCTAATTTAGCCG
TCGTTGGCCGTTATGTACTCTCTGCGGATATTTGGTCCCTACTGGAGAAAACCCCGCCGGGTGCTGGCAATGAAATTCAG
TTAACCGATGCCATCGCAATGTTGATGGAAAAAGAGACGGTAGAAGCCTATCACCTGAAAGGTGTGAGCCATGACTGTGG
TAATAAATTAGGCTATATGCAGGCATTCGTGGAATATGGTTTGCGCCATGACGGTTTAGGTCAGGAATTTGCGCAATGGC
TGCAGGAAACGATTGAAGCAGAAGAAAAATAA

Protein sequence : 
MSIVNKKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGINEIILVTHSSKNSIENHFDTSFELEA
ILEKRVKRQLLEEVQSICPKHVTIMQVRQGLAKGLGHAVLCAHPLVGDEPVAVILPDVIIDEYASDLKKDNLSEMLQRFS
TTGHSQIMVEPVENVSSYGVVDCKGVELKAGDSAPMVGVVEKPKASEAPSNLAVVGRYVLSADIWSLLEKTPPGAGNEIQ
LTDAIAMLMEKETVEAYHLKGVSHDCGNKLGYMQAFVEYGLRHDGLGQEFAQWLQETIEAEEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 1e-52 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PC1_1980 YP_003017557.1 UTP-glucose-1-phosphate uridylyltransferase VFG0964 Protein 1e-55 44