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Name : PC1_1972 (PC1_1972) Accession : YP_003017549.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : - Position : 2265014 - 2266939 bp Length : 1926 bp Strand : + Note : KEGG: eca:ECA2337 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein DNA sequence : ATGCGACTTTTTATTGCCGAAAAGCCCAGCCTCGCGCGGGCGATTGCAGACGTGTTACCCAAACCGCATCGACGTGGCGA TGGCTTTATTGCCTGCGGCCAGAATGATGTCGTGACGTGGTGCGTAGGACACCTGCTGGAGCAGGCGCAGCCGGATGTTT ATGATGCGCGCTACGCCCGGTGGTCTCTTGCCGATTTACCTATCATTCCTCAGAAATGGTTGCTGCAACCGCGTCCCTCG GTCAGTAAGCAGTTGAACACCATTAAAAAGCTCCTGAATGATGCCAACGAAGTGATCCACGCGGGAGACCCCGATCGTGA AGGGCAACTGCTGGTGGATGAAGTGTTGGAATATCTGGCTTTGCCGGAAGAGAAACGCCAGCAGGTGCGTCGTTGCCTGA TCAATGATCTCAACCCACAGGCGGTAGAGCGCGCGGTTTCTCGTTTGCGTGAGAACCGAGAGTTCATTCCTTTGTGCGTG TCGGCACTGGCGCGTTCCCGTGCAGATTGGCTCTACGGCATTAACATGACCCGTGCCTATACGCTATTAGGACGCAATGC CGGCTATGATGGCGTGTTGTCGGTTGGCCGCGTGCAAACGCCGGTGCTGGGGCTGGTGGTGCGGCGGGATGAAGAAATCG AAAACTTCGTTGCCAAAGATTACTTTGAAGTGAAAGCCCATATCGTGACGCCTGCCGATGAGCGCTTTGTCGCACTCTGG CAGCCCAGCGAATCCTGTGAACCTTATCAGGATGAAGAAGGGCGGTTATTGCATCGTTCTCTGGCAGAACATGTCGTCAA ACGTATTGAAGGCCAGCCCGCGTTTGTCACCAGCTATAATGATAAACGGGAATCGGAAACCGCGCCGCTCCCTTATTCGC TGTCGACACTACAGATCGAAGCGGCGAAGCGTTTCGGGCTGAGTGCTCAACAAGTGCTGGATGTGTGCCAGAAACTCTAT GAAACCCATAAGCTGATCACCTATCCGCGTTCTGATTGCCGCTATCTGCCCGAGGAACATTTTGCCGGGCGTCACGCCGT CTTAAACGCGATATCCGTGCACCAGCCGGATCTACTGCCACAGCCGGTTATGGATGTGGATCGACGCAACCGTTGCTGGG ACGATGGTAAGGTCGATGCTCACCACGCAATTATTCCTACCGCTCGTAGCGCAAGCGCCTCGCTGACGGAAAATGAGCGT AAAGTGTATGGTTTAGTTGCACGGCAATACATCATGCAATTTTGCCCAGACGCCGTGTTCCGCAAGTGTGTCATTGAACT GGATATTGCAGGGGGTAAATTTATTACCAAAGCACGGTTCCTGGCCGAAGCCGGGTGGCGCACGCTGCTGGGCGGTAAAG AACGCGACGAAGAAAACGAAGGCATGCCGTTGCCCGTGGTGGCAAAAGGTGATGAGCTACTGTGTGAACGCGGTGAAGTG GTTGAGCGCCAAACGCAGCCGCCGCGACCGTTTACCGATGCGACGTTGCTGTCGGCGATGACGGGTATCGCGCGTTTTGT GCAGGATAAAGAACTGAAGAAAATCCTACGGGCGACCGATGGATTAGGCACAGAGGCGACGCGAGCAGGTATCATCGAAT TATTATTTAAACGGACGTTTCTATTTAAGAAAGCGCGCTATATTCACGCGAGTGAAGCGGGACGGGCGTTGATTCACTCA CTGCCTGCCAGTGCAGCACACCCAGACATGACGGCGCATTGGGAAGCCACGTTGACACAAATCAGCGAGAAGAAATGCCG CTATCAGGATTTTATGCAGCCGCTGACTCATTCCCTGCAGGAGCTGATTCAGCAGGCCAAACAAAACGGTGCGGTGAGAG CGTTTAAAGGGCTTTCCGCGCCGCAGTCGGGTGCCGCAAAACGGCGCAAGCCTCAGACTAAAAAAGCGAAGGAGCAGGAG CAATGA Protein sequence : MRLFIAEKPSLARAIADVLPKPHRRGDGFIACGQNDVVTWCVGHLLEQAQPDVYDARYARWSLADLPIIPQKWLLQPRPS VSKQLNTIKKLLNDANEVIHAGDPDREGQLLVDEVLEYLALPEEKRQQVRRCLINDLNPQAVERAVSRLRENREFIPLCV SALARSRADWLYGINMTRAYTLLGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIENFVAKDYFEVKAHIVTPADERFVALW QPSESCEPYQDEEGRLLHRSLAEHVVKRIEGQPAFVTSYNDKRESETAPLPYSLSTLQIEAAKRFGLSAQQVLDVCQKLY ETHKLITYPRSDCRYLPEEHFAGRHAVLNAISVHQPDLLPQPVMDVDRRNRCWDDGKVDAHHAIIPTARSASASLTENER KVYGLVARQYIMQFCPDAVFRKCVIELDIAGGKFITKARFLAEAGWRTLLGGKERDEENEGMPLPVVAKGDELLCERGEV VERQTQPPRPFTDATLLSAMTGIARFVQDKELKKILRATDGLGTEATRAGIIELLFKRTFLFKKARYIHASEAGRALIHS LPASAAHPDMTAHWEATLTQISEKKCRYQDFMQPLTHSLQELIQQAKQNGAVRAFKGLSAPQSGAAKRRKPQTKKAKEQE Q |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 3e-111 | 41 |
