Name : PC1_1916 (PC1_1916) Accession : YP_003017493.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Virulence Product : ABC-3 protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1108 EC number : - Position : 2208724 - 2209581 bp Length : 858 bp Strand : - Note : PFAM: ABC-3 protein; transport system permease protein; KEGG: eca:ECA2395 chelated iron transport system membrane protein DNA sequence : ATGACACTGATGAGCTGGCTAATTGACCCACTGACCTATCCCTTCATGCAACGTGCGTTACTTGCCGCCGTCGTCACAGG TACGGTCTGCGCGGTACTGTCGTGCTATCTGGTGCTGAAAGGCTGGTCGCTAATGGGTGATGCCATTTCCCATGCCGTGC TGCCCGGTATCGTTGTCGCGTTTTTACTGGGGATCCCGCTGGTCATCGGCGCGTTCGTTTCCGGTATTTTTTGTGCAGTA GCGACAGGATACGTGAAAGAACACAGCCGCGTAAAAGAAGATACGGTAATGGGGATCATCTTTTCCGGTATGTTTGCGCT GGGACTCGTCATGTTCGCGCGTATCGATACCGATCAGCATCTAAACCATATCTTGTTTGGTAACGTGCTGGGCATCACTC AGCAAGAGCTGACGCAAATCTTGCTGATTGCCGGGGTAACACTGGGTATTGTGTTGCTGAAACGGCGAGATTTCATGCTG TACTGCTTCGATCCCAACCATGCGCGCGTCATCGGCCTGCCCGTTAAGCTGCTACACTATGGATTGCTAAGCCTGCTGGC GATGACGATTGTCGCATCACTACAGGCTGTCGGCGTTATTCTGGTGATTGCGATGCTGATTGCGCCGGGCATTATTGCCT TTATGGTCTGCAAGCGCTTCGAGCGTATGGTGCTTGTCGCCACGCTGGTTTCCGTCATTTCCTGTATCGCTGGTACGCTG ATCAGTTTCTATATTGATGGCGCGACAGGCCCTTGCATCGTTATCGTTCAGGCCCTGTTCTTCACGCTGGCGCTGACATA CCACCAGCTAAAACTGCGTCGTCAGTCGGCATCTCAGGTTGTCACCGACGCGCTATAG Protein sequence : MTLMSWLIDPLTYPFMQRALLAAVVTGTVCAVLSCYLVLKGWSLMGDAISHAVLPGIVVAFLLGIPLVIGAFVSGIFCAV ATGYVKEHSRVKEDTVMGIIFSGMFALGLVMFARIDTDQHLNHILFGNVLGITQQELTQILLIAGVTLGIVLLKRRDFML YCFDPNHARVIGLPVKLLHYGLLSLLAMTIVASLQAVGVILVIAMLIAPGIIAFMVCKRFERMVLVATLVSVISCIAGTL ISFYIDGATGPCIVIVQALFFTLALTYHQLKLRRQSASQVVTDAL |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 2e-67 | 50 |
sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 1e-67 | 50 |
sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 1e-67 | 50 |
sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 8e-68 | 50 |
sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 6e-68 | 50 |
sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 2e-53 | 41 |
sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 2e-53 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
PC1_1916 | YP_003017493.1 | ABC-3 protein | BAC0442 | Protein | 6e-104 | 78 |
PC1_1916 | YP_003017493.1 | ABC-3 protein | BAC0352 | Protein | 3e-68 | 50 |
PC1_1916 | YP_003017493.1 | ABC-3 protein | BAC0441 | Protein | 2e-45 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
PC1_1916 | YP_003017493.1 | ABC-3 protein | VFG0528 | Protein | 3e-68 | 50 |