Gene Information

Name : PC1_1895 (PC1_1895)
Accession : YP_003017472.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2187724 - 2188155 bp
Length : 432 bp
Strand : -
Note : KEGG: eca:ECA2415 hypothetical protein

DNA sequence :
ATGGCGAGAAAACCCCTGGGGAAATACCGACAGCGGGAGATCCGTACCGTCGGATTGATGATTGAATTGTATGAAAAGTA
CCACCCTGAAACCGACGATAACGCGCAGTATAAAGATTTATTCAACTACGCCATCAAGCGTCTGGAGCGCTGTCATTTCG
GTGAAGATAAACCCGCGTGTAAGCATTGCCCTATCCACTGCTATCAACCTGCCAGACGTGAAGCAATAAAAGCGATTATG
CGCTGGTCAGGGCCGCGGATGCTGTTACGTCACCCGATTCTGGCAATACGTCACTTGATTGACGATCATCGACCGGTGCC
GGATTATCCGAAGCCGAAGAAAGAGACCGCGCCAAAAGCGTCAACCGAGCGGGCAACCCGTTTAGCCTCGCAGCAAACGC
CATCGGTGGATACCGACGCGACATTGAGATAG

Protein sequence :
MARKPLGKYRQREIRTVGLMIELYEKYHPETDDNAQYKDLFNYAIKRLERCHFGEDKPACKHCPIHCYQPARREAIKAIM
RWSGPRMLLRHPILAIRHLIDDHRPVPDYPKPKKETAPKASTERATRLASQQTPSVDTDATLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ygbA NP_461781.1 hypothetical protein Not tested SPI-1 Protein 2e-30 60
STY2982 NP_457254.1 conserved hypothetical protein Not tested SPI-1 Protein 2e-30 60
ygbA NP_806463.1 hypothetical protein Not tested SPI-1 Protein 2e-30 60
ygbA YP_217780.1 hypothetical protein Not tested SPI-1 Protein 2e-29 60