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Name : PC1_1772 (PC1_1772) Accession : YP_003017349.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Virulence Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : - Position : 2044379 - 2045131 bp Length : 753 bp Strand : + Note : TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; KEGG: eca:ECA2554 3-deoxy-manno-octulosonate cytidylyltransferase DNA sequence : ATGACCTATACCGTGATCATTCCTGCGCGTTTTGCGTCAAGCCGACTGCCGGGTAAGCCGTTGGCGGACATTAACGGTAA ACCGATGGTCGTCCATGTGATGGAGCGGGCGCTGGAATCGGGAGCGCAGCGCGTGATTGTCGCCACCGACCATCCTGATG TTGAAACGGCCGTGAAGCAAGCTGGTGGTGAAGTCTGCCTGACCCGCGCCGATCATAATTCCGGCACGGAGCGCCTGGCT GAAGTTATCGAACGCTACGGTTTTACTGACGATGACATCATCGTTAACGTTCAGGGTGATGAGCCACTCATCCCTTCCGT GATCATTCGCCAGGTGGCGGAAAACCTCGCAGCCAGTAAAGCGGGAATGGCAACGCTGGCGGTGCCGATTGAAACCAGCG AAGAAGCATTCAACCCGAATGCAGTAAAAGTGGTGACCGACGCGGAGGGATATGCGCTGTATTTTTCTCGTGCGACGATC CCTTGGGACAGAGAGCGTTTTGCTCAGTCTAAGGAAACTATTGGCGATCATTTCCTGCGTCATCTCGGCATCTATGCCTA CCGTGCCGGGTTTGTGCGTCGTTATGTCAGTTGGGCACCGAGCCAACTGGAGCAAATCGAATTACTGGAACAGCTGCGCG TGCTATGGTACGGCGAGAAGATTCATGTTGCGGTTGCGAAAGCGGTGCCTAGCGTTGGCGTGGATACGCCAGAAGATCTG GCGCGTGTGCGGCACGTTATGGCGAATCGCTAA Protein sequence : MTYTVIIPARFASSRLPGKPLADINGKPMVVHVMERALESGAQRVIVATDHPDVETAVKQAGGEVCLTRADHNSGTERLA EVIERYGFTDDDIIVNVQGDEPLIPSVIIRQVAENLAASKAGMATLAVPIETSEEAFNPNAVKVVTDAEGYALYFSRATI PWDRERFAQSKETIGDHFLRHLGIYAYRAGFVRRYVSWAPSQLEQIELLEQLRVLWYGEKIHVAVAKAVPSVGVDTPEDL ARVRHVMANR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 1e-33 | 45 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 8e-34 | 45 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 4e-34 | 45 |
