Gene Information

Name : PC1_1766 (PC1_1766)
Accession : YP_003017343.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4604
EC number : -
Position : 2037519 - 2038277 bp
Length : 759 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA2561 putative iron ABC transporter, ATP-binding protein

DNA sequence : 
GTGATTGAGATCGGCAATGTAACTAAAACGTATAATAACGTGACGGTATTAGACAATGTCTCGGCGACGGTGCCTCGTGG
CGGTGTGACGTCGATTATCGGCCCGAATGGGGCAGGGAAGTCGACATTGTTGTCCATTATCAGCCGCTTGCTGGAAGCGG
ATCGCGGACAGGTAAAAGTGAACGGCATGGATGTGATGACAACGCCAAGCGATAAGCTGGCGACGTGTTTGTCCGTGCTA
CGGCAGGAAAACCAGTTTACCAGCCGTTTAACGGTAGCGGAGCTGGTGGGGTTTGGCCGTTATCCCTATACCAAAGGGCG
GCTGAATGCTGACGATCGTGAACGCATCAGCGCTGCATTGGCGTTCCTCAATCTGACTGAGTTGAAAGATCGGTTTTTAG
ATGAGCTTTCCGGTGGTCAGCGGCAGCGGGCTTATGTCGCTATGGTGCTGTGTCAGGACACGGAATATGTGCTGCTGGAT
GAACCGCTGAATAATCTGGATATGAAACACGCGGTGGCGATGATGAAACAGATTCGTCGTGCGGCTGATGAGCTAGGTAA
AACCATTGTGCTGGTTATCCACGATATCAACTTTGCTTCCGCCTATTCGGACTACATTATTGCGATGCGCAAAGGGCAGG
TTATCTACACGGGGAAACCGGAGGACATCATGGTGTCCGACGTCCTGGAAGATATTTTCGATACCGAAGTTGCCATCGAA
GAGGTTCATAATCAGCGCATCGCGGTATACTATCGATAA

Protein sequence : 
MIEIGNVTKTYNNVTVLDNVSATVPRGGVTSIIGPNGAGKSTLLSIISRLLEADRGQVKVNGMDVMTTPSDKLATCLSVL
RQENQFTSRLTVAELVGFGRYPYTKGRLNADDRERISAALAFLNLTELKDRFLDELSGGQRQRAYVAMVLCQDTEYVLLD
EPLNNLDMKHAVAMMKQIRRAADELGKTIVLVIHDINFASAYSDYIIAMRKGQVIYTGKPEDIMVSDVLEDIFDTEVAIE
EVHNQRIAVYYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-38 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PC1_1766 YP_003017343.1 ABC transporter-like protein BAC0164 Protein 7e-39 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PC1_1766 YP_003017343.1 ABC transporter-like protein VFG1042 Protein 7e-39 43