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Name : PC1_1722 (PC1_1722) Accession : YP_003017299.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1987344 - 1988639 bp Length : 1296 bp Strand : + Note : KEGG: eca:ECA2644 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like DNA sequence : ATGCTCGATCCCAATTTACTGCGTAATGAGCTAGACGCAGTCGCCGAAAAGTTACTGGCTCGCAGAGGCTTTAAGCTGGA TGTTGAGACCCTGCGTAAGCAGGAAGAACGTCGTAAGGTATTGCAGGTAGAAACCGAAAACCTGCAGGCAGAGCGTAACT CCCGATCGAAAGAGATTGGTGCAGCGAAAGCACGCGGTGAAGATATCGAGCCTTTGCGTCGTGAAGTTAACACATTAGGC GAAAAACTGGATGCCGCGAAAGCCGAGCTGGATCAGTTGCAGAATGAAATTCGCGATCTGGCGTTAACCATTCCAAACCT GCCGGACGACTCCGTCCCGCTTGGCAAGGATGACACGCAGAACCAGGAAGTGACCCGCTGGGGTGAACCACGTAAGTATG ATTTCCCGGTACGCGACCATGTTGAGCTTGGTGAAATGGCTGCCGGACTGGATTTTGCCGCTGCGGTAAAATTAACCGGT GCGCGTTTTGTTGTGATGAAAGGACAGATCGCTCGCCTGCATCGTGCACTTTCCCAGTTCATGCTGGATTTACATACGCA GCAACACGCTTATCAGGAAGCGTATGTGCCTTATCTGGTAAACCATGCCACGTTATACGGTACGGGTCAGTTGCCTAAAT TTGGCGAAGACCTGTTCCACACTAACCCGTTAAGCGAAGAAGCAGAAAGCAGCCAATATGCGCTGATTCCGACGGCTGAA GTTCCGCTGACCAACCTGGTGCGTGACGAGATTCTTGATGAAGAATCTTTGCCACTGAAGATGACTGCACATACGCCTTG CTTCCGTTCTGAGGCGGGGTCGTATGGTCGCGATACGCGTGGTTTGATTCGTATGCACCAGTTTGACAAGGTTGAGCTGG TACAAATCGTCCGTCCTGAAGATTCTATGCAGGCGCTGGAAGAGCTGACAACCCATGCCGAAACGGTGCTGCAACTGCTG AAATTGCCTTATCGTAAGGTCTTACTGTGTACCGGCGACATGGGCTTTGGTTCGACTAAAACCTACGATCTGGAAGTCTG GCTGCCCGCGCAGGATACGTACCGTGAAATCTCCTCTTGCTCAAACATGTGGGATTTTCAGGCGCGTCGTATGCAGGCTC GCTGCCGCAGCAAGTCCGACAAGAAGACCCGTTTGGTTCATACGTTGAACGGTTCTGGTCTGGCAGTTGGCCGTACTCTG GTGGCAGTTCTGGAAAACTACCAGCAGGCTGATGGCCGTATTGAGATTCCTGAAGTGTTGCGTCCGTATATGGGCGGGCT GGAATTTATTGGCTAA Protein sequence : MLDPNLLRNELDAVAEKLLARRGFKLDVETLRKQEERRKVLQVETENLQAERNSRSKEIGAAKARGEDIEPLRREVNTLG EKLDAAKAELDQLQNEIRDLALTIPNLPDDSVPLGKDDTQNQEVTRWGEPRKYDFPVRDHVELGEMAAGLDFAAAVKLTG ARFVVMKGQIARLHRALSQFMLDLHTQQHAYQEAYVPYLVNHATLYGTGQLPKFGEDLFHTNPLSEEAESSQYALIPTAE VPLTNLVRDEILDEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVRPEDSMQALEELTTHAETVLQLL KLPYRKVLLCTGDMGFGSTKTYDLEVWLPAQDTYREISSCSNMWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTL VAVLENYQQADGRIEIPEVLRPYMGGLEFIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-104 | 55 |
