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Name : PC1_1642 (PC1_1642) Accession : YP_003017219.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : ABC transporter-like protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 1889976 - 1891592 bp Length : 1617 bp Strand : - Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: eca:ECA2739 putative ABC-transporter, ATP-binding protein DNA sequence : ATGTCCAGTTCACCTTTATTGCAGATAGATAATCTCAGCATTGCCTTCCGCAAAGGCGATCAGGAGCAGCGCGTTGTTGA CCAGCTTTCACTGACGGTGAATGCTGGCGAGACGCTGGCGCTGGTCGGTGAATCAGGCTCGGGTAAGAGCGTCACTGCGC TGTCGGTTTTGCGTTTGCTCCCTTCCCCGCCCGTCATTTATCCACATGGAGATATCCGCTTCGCAGGACAATCGCTGCTG CATGCTGATGAAAAAACACTGCGCCAGATACGCGGCAATCGGATCGCAATGATCTTTCAGGAACCGATGGTGTCGCTTAA TCCTTTGCAACGCATTGAGAAACAGCTGATTGAAGTGCTTTCACTTCACCGGGGCATGCGCACCGAGGCAGCCCGCAGCG AAGTCATCACCTGTCTGGATCGCGTAGGGATTCGTCAGGCGAAAAGCCGATTGAATGATTTTCCGCACCAGCTTTCCGGC GGGGAACGCCAGCGCGTCATGATTGCAATGGCGCTGCTGACACAGCCGGATTTACTGATTGCCGATGAACCCACGACGGC GTTGGACGTGACCGTTCAGGCGCAAATATTGAAATTGCTGAACGAGCTGAAGCAGGAACTGGGAATGAGTTTACTGTTCA TCACCCACAACCTGAATATTGTCCGTCAGTTAGCGGATAACGTATCGGTCATGAAAGCCGGTCAGGCCGTGGAGCATAAT CGCTGTCAGCAACTTTTCAGTGCACCGCAGCACCCCTATACGCGCCAGCTGCTGGATGCAGAACCCTCAGGCGAACCGCT TCCGGTGACAGATGACGGTGAACCACTCCTGCGGGTGGAAAAACTGCACGTTTCGTTTCCCATCAAACGCGGCCTTTTGC GCCGTACCGTTGATGAAAAACAGGTAGTGAACGATATCAATTTCACCTTGCGGCGCGGCGAAAGTCTCGGTTTGGTAGGA GAATCCGGCTCAGGCAAAAGTACGACCGGGTTAGCGCTACTGCGCCTGATTCAATCACGCGGTGATATCTGGTTTGACGG TCAGCCCTTACAGGGGCTCACCCGTAAGCAAATGCTGCCTTTCCGCCATCGGATTCAGGTTGTGTTTCAGGATCCGAACT CCGCGCTGAACCCGCGGCTGAACGTGGAGCAAATTATTGCTGAGGGGTTGACCGTCCATCATAAGTTGAGCAAAGAAGCG CGCGACCAGCGTGTGGTTGAAGCGATGCAGGAAGTCGGGCTGGATCCTACGACCCGCTACCGCTATCCCTCCGAGTTTTC CGGCGGCCAGCGCCAGCGTATCGCTATCGCTCGTGCCCTGATACTGCAACCGGAGTTGCTGATCCTTGATGAACCAACAT CATCGCTGGACAGAACGGTTCAGGCACAAATTCTGGCATTGCTGAAATCATTGCAGGAAAAGCACAAGATCGCCTATCTG TTTATCAGTCATGATTTGCAGGTTATCCGCTCGCTGTGTCATCAGGTGATTGTGTTACGACAGGGCGAAGTGGTTGAGCA AGGGGAATGCAAAGCGGTATTCACGCACCCTGCTGAACATTACACGCGGGAATTGCTACAGTTTTCATCTTACTCGACGG AAACACCGTCGGCATAG Protein sequence : MSSSPLLQIDNLSIAFRKGDQEQRVVDQLSLTVNAGETLALVGESGSGKSVTALSVLRLLPSPPVIYPHGDIRFAGQSLL HADEKTLRQIRGNRIAMIFQEPMVSLNPLQRIEKQLIEVLSLHRGMRTEAARSEVITCLDRVGIRQAKSRLNDFPHQLSG GERQRVMIAMALLTQPDLLIADEPTTALDVTVQAQILKLLNELKQELGMSLLFITHNLNIVRQLADNVSVMKAGQAVEHN RCQQLFSAPQHPYTRQLLDAEPSGEPLPVTDDGEPLLRVEKLHVSFPIKRGLLRRTVDEKQVVNDINFTLRRGESLGLVG ESGSGKSTTGLALLRLIQSRGDIWFDGQPLQGLTRKQMLPFRHRIQVVFQDPNSALNPRLNVEQIIAEGLTVHHKLSKEA RDQRVVEAMQEVGLDPTTRYRYPSEFSGGQRQRIAIARALILQPELLILDEPTSSLDRTVQAQILALLKSLQEKHKIAYL FISHDLQVIRSLCHQVIVLRQGEVVEQGECKAVFTHPAEHYTRELLQFSSYSTETPSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-78 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 6e-78 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-78 | 42 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-78 | 42 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 6e-88 | 42 |
