Gene Information

Name : PC1_1540 (PC1_1540)
Accession : YP_003017119.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1686
EC number : -
Position : 1793962 - 1794909 bp
Length : 948 bp
Strand : +
Note : PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; beta-lactamase; KEGG: eca:ECA2792 D-alanyl-D-alanine endopeptidase

DNA sequence : 
ATGACTAAAAATTTTAAGCTTTCTCTTTGTGGCCTGTTGATGCTATCAACCCATGCTGTGATGTTGCCTCAGGCTATGGC
GAAAGCGCCGACGTATTCCGCCGGCACTGCGCATCAGGAAATTGCTTCCGGTAGCGCTATGGTGGTGGATTTGCGTGATA
ACCACATCCTGTATTCCAGTAACCCAGATGTGGTGGTACCGATTGCTTCGGTGACGAAATTGATGACGGCGCTGGTGGTG
CTGGATGCCAATCAGCCGCTGGATGAAATCATCTCTGTCGATATCAGTCAGACGAAAGAAATGAAAGGGGTGTACTCGCG
TGTTCGTCTGAACAGCGAGATCAGCCGCCGTGACATGCTGCTACTGGCGCTGATGTCATCAGAAAACCGCGCGGCGGCCA
GTCTGGCGCACCACTATCCAGGCGGCTATCAGGCATTTATCCGTGCGATGAATGCCAAAGCCCGTGCGCTAGGTATGGCT
CACACGCGCTATGTCGAGCCGACCGGGCTGTCCATCAATAACGTCTCGACCGCCCGCGATCTCACCAAACTCCTGATTGC
CAGTAAGCAATATCCGTTGCTGAGCCAGCTGAGTACGACACAGGAGAAAACGGCGACGTTCTCTCATCCGGCGTACAGCC
TGCCGTTCAGAAACACGAACCATCTGGTCTATAAAGCCGACTGGAGCATCCAACTGACCAAAACGGGCTTCACGAATCAG
GCGGGACATTGTCTGGTGATGCGCACGGTTATTAACCAGCGGCCTGTTGCGCTGGTGGTGCTGGATGCATTCGGTAAATA
CACGCACTTTGCGGATGCTAATCGTCTGCGTAAGTGGATAGAAACCGGCAAGGTCAGCGAGGTGCCTGCTGCTGCGTTGA
GCTATAAGAAGCAAAAATCGCTGGCTTCTCGTCAACCGCAGAGCATGGCGAGTATCGAAACCGAATAA

Protein sequence : 
MTKNFKLSLCGLLMLSTHAVMLPQAMAKAPTYSAGTAHQEIASGSAMVVDLRDNHILYSSNPDVVVPIASVTKLMTALVV
LDANQPLDEIISVDISQTKEMKGVYSRVRLNSEISRRDMLLLALMSSENRAAASLAHHYPGGYQAFIRAMNAKARALGMA
HTRYVEPTGLSINNVSTARDLTKLLIASKQYPLLSQLSTTQEKTATFSHPAYSLPFRNTNHLVYKADWSIQLTKTGFTNQ
AGHCLVMRTVINQRPVALVVLDAFGKYTHFADANRLRKWIETGKVSEVPAAALSYKKQKSLASRQPQSMASIETE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00303 YP_008207768.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR25 Protein 4e-42 43
BJAB0868_00307 YP_008211633.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR26 Protein 4e-42 43