Gene Information

Name : PC1_0150 (PC1_0150)
Accession : YP_003015748.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 180002 - 180760 bp
Length : 759 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA4296 sulfate ester ABC transporter ATP-binding protein

DNA sequence :
ATGTCCCTGCATTTTCAGCACATTACTAAACACTTTATCGTCAACGGCACCCCGCTGACGGTGTTGCAGGATATCGATCT
GTCGCTGCATGCGGGTGAACTGGTTGCCATCATCGGTGCCAGTGGCTGTGGTAAATCGACGCTGCTGCGTTTGGCCGCCG
GGATTGACACCACGGAACGCGGACGCATTCTGATTGGCGAGCGGCCTGTGCGTGGTATTCCCGACGATGTCAGTCTGGTG
TTTCAGGAACCGCGCCTGTTTCCGTGGCTCACCGTGACGGACAATATTCGCCTCGGTATGCTCAACCTCAATCTGTCTCC
TGCTGAGGTAGAGCGTCGTATTGCACACTATCTTCAGATGATGGGGCTGGAAGGCTTTGCCGATGCATGGCCGCATCAGC
TATCAGGGGGAATGGCGCAGCGTGTGGCAATTGCCCGTGGGCTGGTGTCGACGCCGCACATTCTTTTGCTGGATGAACCT
TTTGGGGCACTGGATGCGTTAACCAAGCAGCAGTTGCAGGCGCGTTTGGCGGAGATACGCCAGCAAACGGATTTGACGAT
CCTGCTGGTGACACACGATGTGGAGGAAGCCGTCTTTCTGGCGGACAGGGTGGTGGTGATGTCGCCTCGACCCGGCCGGA
TTAGCAGGATTCTACCGATAAACCTCACTTATCCTCGTGACCGAACCAGCACTGCATTGTTGGAGCAACGACAAGCGGTC
AGTCAGGCGCTACATCAGGCGGATGCTGTTGAAGCCTGA

Protein sequence :
MSLHFQHITKHFIVNGTPLTVLQDIDLSLHAGELVAIIGASGCGKSTLLRLAAGIDTTERGRILIGERPVRGIPDDVSLV
FQEPRLFPWLTVTDNIRLGMLNLNLSPAEVERRIAHYLQMMGLEGFADAWPHQLSGGMAQRVAIARGLVSTPHILLLDEP
FGALDALTKQQLQARLAEIRQQTDLTILLVTHDVEEAVFLADRVVVMSPRPGRISRILPINLTYPRDRTSTALLEQRQAV
SQALHQADAVEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 6e-47 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-23 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-23 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-23 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-22 43