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Name : PC1_1440 (PC1_1440) Accession : YP_003017022.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Virulence Product : ABC transporter-like protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 1688044 - 1689870 bp Length : 1827 bp Strand : + Note : PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: vei:Veis_2441 ABC transporter related DNA sequence : ATGCCACATTCCGCTGTTGAGGGCGGTTCATCCGCTGCCACGCCGCCTTCTACGCCACAGAGCCGCGCCTGGCACATTAT GCACCCTGTAAGAGGGCAGATTCGTTTGGCGATGTGCCTGTCAGGGCTGTCGGTTCTGGCTGGCATCGCATTTCTGCTTT TTCTGGCATGGGGTATCCGACTGCTCATTTTACAACCCGCGTCATGGCCGTTGTTGACGATGGTCGGGGCGGTGCTGTGT TTGAGCGCCAGCTATCTGCTGCGTTTGCTGGCTTTTGACCAGTCTCACTATGCCGCATTCCGGCTGGAAAACCAGATTCG TATCGCGCTGGCAGAACAGCTGGCGCGGATCCCACTGGGCGAGGTGCGGCGTTTGGGTACGGGCTCGCTGGCAAAGATCG TGCAGGACGATGTCAAAGCGCTCCACCTGTTTGTGGCGGACAGCACGCCGCTCTATGCGCGTGCTTTTGTGGCGCCGCTG TGTACGGGGGCATTGTTGTTCTGGCTGGACTGGCGCTTAGCACTGGCAGCCTTGCTGGTGCTGCTCGTCGGCGCTGCCGT GCTGACGCTGGCGATGCGCGATGCCGGTGAGATGAACCAACGCTATAACCAGGCGCGGGAAGCGGTTAGTACGGCAGTGA TTGAATTTGTACAGGCAATGCCGGTAGTGCGTACCTTCGATACTGGCGCGTCAACGTTTGGACGTTACCAGCAGGCGCTG GAACATTATCTGGACGTGCTCACGCGCTGGTATCAGCAAGCGGGTTTCTCGGCGCGTTTCTCCTTCGCGATACTTAATCC GCTTCCAACGCTGCTGGTGCTGTGCTGGGTGGCGTACGGTTTCTATCATTCCGGCGATCTTGATTTCAGCCTGTGGGTAG CGGTGCTGCTGCTCGGCAATGGCATGGCAGAGGCCATTATGCCAATGATGGCACTGAATCACATGGTGGCGAAAACCCGA TTGAGCATCAGCCGGATTCAGGACGTGTTGGCATTGTCGCCGCTGCCGGAAGCGGAAAATGATGCCTTACCCGCTGATGC CAGTGTGAGCTTTGAGCAGGTGAGTTTTCGCTACGACCGGCACGTGAGCGACTGGGTGCTGGAGGATGTCAGTTTTCAGG TGCCAGCAGGATCGGTTACGGCGCTGGTGGGCGCATCTGGCGCGGGGAAAACCACCGTGGCGCGGCTTATTCCTCGGTTT TGGGACGTAACCGCCGGGCGCATTTTGATTGGTGGTGTTGATATCCGACAGATGAAAACCGCCACGCTCATGCAGCAGGT GTCGTTTGTTTTTCAGGAGTCTTTCCTGTTTGCGGACACTATCGCCAATAACATTCGGCTGGGTGTGCCGGAGAAAAGCA TGGACGAGGTGATTGCCGCCGCAACGGCAGCGCAGGCGCACGATTTTATCATGGCGCTGCCGCAGGGCTACGACACGCCA GCCGGTGAGCGTGGCCAGTTCCTTTCCGGCGGTCAGCGTCAGCGCATCGCCATTGCGCGGGCGCTACTGCATAACCGGCC GATTCTGGTGCTGGACGAACCCACGGCGTTTGCCGACCCGGAAAACGAGGCAGCACTGCTGGCGGCACTCGGCGTACTTA TGCGAGGTAAAACGGTCATCATGGTGGCGCATCGACTGTCGACGATTCGTGATGCCGATCAGATTGTGGTTTTCGATCGC GGGCGGCTGAGCGAGTCGGGTCGCCATGATGCGCTGTTGGTTGCACAAGGCCGCTATAGCGAACTGTGGCGGCATTATGA GCAGGCGCAGAATTGGGCGTTAGGCGGCGCATCATCAGTTAATGGGCAGGCAGGAGAGCGGGCGTGA Protein sequence : MPHSAVEGGSSAATPPSTPQSRAWHIMHPVRGQIRLAMCLSGLSVLAGIAFLLFLAWGIRLLILQPASWPLLTMVGAVLC LSASYLLRLLAFDQSHYAAFRLENQIRIALAEQLARIPLGEVRRLGTGSLAKIVQDDVKALHLFVADSTPLYARAFVAPL CTGALLFWLDWRLALAALLVLLVGAAVLTLAMRDAGEMNQRYNQAREAVSTAVIEFVQAMPVVRTFDTGASTFGRYQQAL EHYLDVLTRWYQQAGFSARFSFAILNPLPTLLVLCWVAYGFYHSGDLDFSLWVAVLLLGNGMAEAIMPMMALNHMVAKTR LSISRIQDVLALSPLPEAENDALPADASVSFEQVSFRYDRHVSDWVLEDVSFQVPAGSVTALVGASGAGKTTVARLIPRF WDVTAGRILIGGVDIRQMKTATLMQQVSFVFQESFLFADTIANNIRLGVPEKSMDEVIAAATAAQAHDFIMALPQGYDTP AGERGQFLSGGQRQRIAIARALLHNRPILVLDEPTAFADPENEAALLAALGVLMRGKTVIMVAHRLSTIRDADQIVVFDR GRLSESGRHDALLVAQGRYSELWRHYEQAQNWALGGASSVNGQAGERA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ybtP | NP_669704.1 | permease and ATP-binding protein of yersiniabactin-iron ABC transporter | Virulence | HPI | Protein | 8e-143 | 60 |
| ybtP | NP_993009.1 | permease and ATP-binding protein of yersiniabactin-iron ABC transporter | Virulence | HPI | Protein | 8e-143 | 60 |
| ybtP | YP_070126.1 | lipoprotein inner membrane ABC-transporter | Virulence | HPI | Protein | 3e-142 | 60 |
| irp6 | YP_001006813.1 | lipoprotein inner membrane ABC-transporter | Not tested | HPI | Protein | 2e-142 | 60 |
| ybtP | YP_853073.1 | inner membrane ABC-transporter | Not tested | PAI IV APEC-O1 | Protein | 1e-142 | 60 |
| irp6 | YP_002346904.1 | lipoprotein inner membrane ABC transporter | Not tested | HPI | Protein | 1e-142 | 60 |
| ybtP | CAA21388.1 | - | Virulence | HPI | Protein | 1e-142 | 60 |
| irp6 | CAB46573.1 | lipoprotein inner membrane ABC-transporter, Irp6 | Virulence | HPI | Protein | 2e-141 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PC1_1440 | YP_003017022.1 | ABC transporter-like protein | BAC0432 | Protein | 5e-143 | 60 |
