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Name : PC1_1439 (PC1_1439) Accession : YP_003017021.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Virulence Product : AraC family transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG2207 EC number : - Position : 1686827 - 1687795 bp Length : 969 bp Strand : - Note : PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: yen:YE2616 transcriptional regulator YbtA DNA sequence : TTGAACGCCTCCCCACTGAAAGCCACCAGCGAACCTGAAGTCACTATTTCAAATTTGATTGCTGAACTGCACGTTGTGCG GCCGGACACCGGTGCGGACTGTAGCCTGCTGCGCGCTACGCTTCAGGAAGGGCTGGATATTCTGGTGTGGCGTGGACAGT TCCGACAGCCCACCACCATGCATTTGCATGACGACTGGGGACGCATCAATTTTTCCTGTTCATTGCAGGGAGATTCGCAA TTTGCACTGAAAGGCGATCGGGGGCGTGAACATCTGCTGAAGCAAGGTTCGGGCTGCATTAGCTACACTCCAGACTGTCA GGGTACGTCGTCTTACGCCGGGCAGTTTGAAAGTGTCACCGTATCGCTAAGCCCCGAGCTACTGGCTAACTGGGTGCCGG ATCTCGCCGGTAACCTGCAACAGCAGTTGGATTCCGGTAGGCTCTGCACCCACTGTGACTGCAACGCCGAAATGCGGGCA ACGGCTCAGGTATTAAGCCATGCGCTGTCTGGGTTGACGCATCCGCAGCAGGTCGGTGAAAGCCGCCATGCACCGCTGTG GCTGCTGGGACAAAGCATGATTATGGTGAGTCTCGCCGTCGCCGGACATGCCGACACCGCCCCCCAGCAGGACACGCTGA GTCTGGCCGATCGCCACAAGCTGCTGCGCGCCAAAGATCTGCTGTTAGCGGATCTGTCACAGGCACCCACTATCGCCATG CTATCCAGAGAAACCGGGTTAAGCGTACTCAAGCTGAAACGTGGGTTTCGCCTGCTCTTCAATAACAGCATCTATGGGTT ATTCCAGGCCGAACGTATGCACGAAGCGCGGCGTCGCTTGTTTGCCACAGGTGCCCCCGTTATGGTGGTTGCCACCGATC TGGGCTATGCCAACGCCAGCCACTTTAGCGCCGCTTTCCAAAAGCAGTTTGGCGTCACACCTTCCGCTTTCAAGCGCCTG AACATTTAG Protein sequence : MNASPLKATSEPEVTISNLIAELHVVRPDTGADCSLLRATLQEGLDILVWRGQFRQPTTMHLHDDWGRINFSCSLQGDSQ FALKGDRGREHLLKQGSGCISYTPDCQGTSSYAGQFESVTVSLSPELLANWVPDLAGNLQQQLDSGRLCTHCDCNAEMRA TAQVLSHALSGLTHPQQVGESRHAPLWLLGQSMIMVSLAVAGHADTAPQQDTLSLADRHKLLRAKDLLLADLSQAPTIAM LSRETGLSVLKLKRGFRLLFNNSIYGLFQAERMHEARRRLFATGAPVMVVATDLGYANASHFSAAFQKQFGVTPSAFKRL NI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ybtA | YP_001006814.1 | transcriptional regulator YbtA | Not tested | HPI | Protein | 5e-69 | 55 |
| ybtA | CAB46574.1 | yersiniabactin transcriptional regulator, YbtA | Virulence | HPI | Protein | 3e-69 | 55 |
| ybtA | YP_002346903.1 | transcriptional regulator YbtA | Virulence | HPI | Protein | 2e-68 | 55 |
| ybtA | NP_669705.1 | AraC family transcriptional regulator | Virulence | HPI | Protein | 2e-68 | 55 |
| ybtA | NP_993008.1 | transcriptional regulator YbtA | Virulence | HPI | Protein | 2e-68 | 55 |
| ybtA | YP_070125.1 | transcriptional regulator YbtA | Virulence | HPI | Protein | 2e-68 | 55 |
| ybtA | CAA21389.1 | - | Virulence | HPI | Protein | 2e-68 | 55 |
| APECO1_1057 | YP_853074.1 | AraC family transcriptional regulator | Not tested | PAI IV APEC-O1 | Protein | 2e-68 | 55 |
