Gene Information

Name : PC1_1436 (PC1_1436)
Accession : YP_003017018.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Virulence
Product : TonB-dependent siderophore receptor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1629
EC number : -
Position : 1682841 - 1684850 bp
Length : 2010 bp
Strand : -
Note : TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: eum:ECUMN_2278 yersiniabactin/pesticin outer membrane receptor (IRPC)

DNA sequence :
ATGAAAATAACGCGTCTTTATCCGCTTGCCTTAACCGGCATATTTCTCTCTTCCTGTGTCTTTGCAGCTCAGGAAGATAC
GCTTGTTGTCTCCGCCAGCAAACAGTCACCCTATTCTGCCTCGGCCAATAACGTCTCTTCCACCGTCGTCACGGCACCGG
AACTGAAAGATGCGGGTGTCACCAGCACCGACAAACTGACCCGCGTGATGCCTGGCCTAAACCTCGGCAATAACGGTAGC
CTGCTGTTCCCCTCCATCTCACTGCGCGGCGTGTCTTCCGCACAGGATTTCTACAGCCCGGCGGTGACAGTCTACGTGGA
CGGCGTACCACAGCTCGCCACTCACACCGTGCAGGCACTCTCCGATGTAGAAAGCATCGAAATGCTGCGAGGCCCGCAGG
GAACGCTATACGGTAAAAGCGCACAGGGCGGTATTATCAATATCGTGACTCAGCAGCCGGACAGCACGCCGCGTGGCTAT
GTCGAAGGCGGCGTAGCCAGCCGCGATGGCTATCACGGCAAAATCAATCTCAGCGGTCCCATTCAGGATGGCCTGCTATA
CGGCAGTGTCACCCTGCTGCGTCAGGTCGATTCGGGGGCGATGACCAACCCCGCGACGGGCAGCGATAACCTCGGCGGGA
CAAAATCCAGCGTCGGGAACCTTCGGCTACGTCTGGCTCCCGAGGGCCAACCGTGGGAAACCAGTCTAGCACTAACGGAA
GACTGCACGCGCGCCACGCAGGATACCTATCTGCCGTTTGGCGATGTGAAAAGCCGGACGCTGGAGATCGCCGCCGGATC
GCCGGATCCCAAACTACGCCGCTGCACCCATAGCCAGTCGCTGAGCGGGAAATACACTACCGACAACTGGATCTTCAGCC
TGATCGGCGCATGGCAGCAGCAAAATTACGAGCGTACCTTCCCGAACAGTACGCTGATTGCCGACATGCCGGAGCGCTGG
AATCAGGACGTGCAGGAACTGCGTGCAGCGACACACGGCGCAGGCCGCACGGTGGATATGGTGTTCGGCCTGTACCGACA
GAACACGCGTGAAAAACTCGATTTAACCTATAGCATGGCAGGCTCTCCGTTTATGAAGAGCAATGCCAACACGTCAACGG
AGACGTTAGCCGCCTACAGCGATCTGACCTGGCACCTGACCGACCGTATCGATCTGGGCGGCGGACTGCGTGTGTCACAC
GATAAAGCTAAAACCCGTTACCACCAGCAGTTCTCCGGCATGAGCGCGAGCGACAGCAATAGCGTTGATGACGATCAGGT
ACTGGGACAGCTCTCCGCCAGCTACCTGCTGAACAATGATTGGCGTGTCTATACCCGCGTCGCGCAAGGCTACAAGCCAA
CTGGCTTTAACTACTCGCCCGCCGCTGGCACTCAGGCCATTCCTTATAATGCGGAGAAATCGATTAACTATGAAATCGGC
TCGCGCTATCAGAACGGCGATGTGCAACTTCAGGGTGCCGTGTTTCATACCCACACGCGTGATATGCAGCTGTATTCCGG
CCCGGTCGGTATGCAAACACTCAGCAATGCAGGCAGCGCCGACGCCAGTGGCGTAGAGATGATGCTGAAGTGGCAGTTCG
TTCCCAACTGGTCATGGGATATCAACGGCACTTATGTCCGTTCTGAATTTACCAGTGACAGTGAGAGCTATCAGGATAAA
CGCGTGCCTTTCGTACCGCGCTACGGTGCCGGTACCAGCCTGAACGGGTTGATTGATACCTCATTCGGCGCATTAATGCC
GCGTCTGGCCTTCAACGTAGTAGGTCCGCACTACTTCGACGGCGACAACGCGTTGCGTCAGGGCACCTATACCACGACCG
ACCTGCGCCTCAGTTGGCAGGCCACTGACCGGGTGAATATCGCCGGCTATGTGGATAACGTCTTCGACCGCCGCTACCGC
ACCTTTGGCTTCATGAGCGGCACCTCGGGCTACGCACAGGTCAATGAAGGCCGAACCGTTGGCGTGGACGTGCGGGTCGA
TTTGTTCTGA

Protein sequence :
MKITRLYPLALTGIFLSSCVFAAQEDTLVVSASKQSPYSASANNVSSTVVTAPELKDAGVTSTDKLTRVMPGLNLGNNGS
LLFPSISLRGVSSAQDFYSPAVTVYVDGVPQLATHTVQALSDVESIEMLRGPQGTLYGKSAQGGIINIVTQQPDSTPRGY
VEGGVASRDGYHGKINLSGPIQDGLLYGSVTLLRQVDSGAMTNPATGSDNLGGTKSSVGNLRLRLAPEGQPWETSLALTE
DCTRATQDTYLPFGDVKSRTLEIAAGSPDPKLRRCTHSQSLSGKYTTDNWIFSLIGAWQQQNYERTFPNSTLIADMPERW
NQDVQELRAATHGAGRTVDMVFGLYRQNTREKLDLTYSMAGSPFMKSNANTSTETLAAYSDLTWHLTDRIDLGGGLRVSH
DKAKTRYHQQFSGMSASDSNSVDDDQVLGQLSASYLLNNDWRVYTRVAQGYKPTGFNYSPAAGTQAIPYNAEKSINYEIG
SRYQNGDVQLQGAVFHTHTRDMQLYSGPVGMQTLSNAGSADASGVEMMLKWQFVPNWSWDINGTYVRSEFTSDSESYQDK
RVPFVPRYGAGTSLNGLIDTSFGALMPRLAFNVVGPHYFDGDNALRQGTYTTTDLRLSWQATDRVNIAGYVDNVFDRRYR
TFGFMSGTSGYAQVNEGRTVGVDVRVDLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF01267.1 FyuA precursor Virulence PAI IV 536 Protein 0.0 71
fyuA AAP70282.1 FyuA Virulence HPI Protein 0.0 70
fyuA YP_001006820.1 pesticin/yersiniabactin receptor protein Virulence HPI Protein 0.0 70
fyuA YP_002346897.1 pesticin/yersiniabactin receptor protein Virulence HPI Protein 0.0 70
psn NP_669711.1 pesticin/yersiniabactin outer membrane receptor Virulence HPI Protein 0.0 70
psn CAA21395.1 - Virulence HPI Protein 0.0 70
fyuA YP_853080.1 pesticin/yersiniabactin receptor protein Virulence PAI IV APEC-O1 Protein 0.0 70
fyuA YP_070119.1 OMR family pesticin/yersiniabactin receptor protein Virulence HPI Protein 0.0 70