Gene Information

Name : PC1_1403 (PC1_1403)
Accession : YP_003016985.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 1638980 - 1639783 bp
Length : 804 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA1530 putative taurine transport ATP-binding protein

DNA sequence :
ATGACAGAATCTTCTCAGCCCGTTGCGCCACACATTGTTGTGGAGCGCGTTAGTCTCACATTTCCGTCACAACGCGGCCC
GCTAACGGTGCTGGATGACGTTTCTCTCCAGATCGCTAAAGGTGAATTTGTGGTGCTGCTGGGTCCTTCCGGCTGCGGCA
AATCCACCATTCTCAATATGATCGCCGGTTTTGAAGCTGCCGATAAGGGGCGCGTACTGTGCGGCGATGAACCTGTTCGT
CGTCCGGGCCCCTCGCGCGGCATGGTATTTCAGCAGGCCAACTTATTTCCCTGGCTCACCGTGCTGGAAAACGTGACGTT
TGGACCACGGATGCAGGGCGCAAATAAAGCCCAGCTTCAGCGTGAAGCAGAAAATTATCTGGCACTGGTCGGGCTGGAAG
GATTCCAACAGCACTACCCCTGGCAACTCTCTGGCGGAATGAAACAGCGGGTGGCACTGGCTCGTGCCTGGCTGCCGAAC
CCTGAGGTGTTGCTGATGGATGAGCCGTTTGGTGCGCTGGATGCACAAACCCGTTTGATGATGCAGGAACTGCTGCTATC
TGCCTGGCAAAAAACCGGCACCACGCTGTTATTTGTCACGCATGACGTGGACGAAGCGCTGTTCTTGGCTGACCGGGTAT
TGGTGATGTCCGCGCGTCCCGGTCGTATTGCTGAAGCAATCCCGCTGCCGTTTGGCCGCGAAAGAGACATTGAAACCCTG
GCACAGCACCCTGACTACGCCGCCTTGAAGCAGCGTATTTTACATCGCGTTCGTGAAGAAGCGCGTCGTCACCTCAATCT
GTAA

Protein sequence :
MTESSQPVAPHIVVERVSLTFPSQRGPLTVLDDVSLQIAKGEFVVLLGPSGCGKSTILNMIAGFEAADKGRVLCGDEPVR
RPGPSRGMVFQQANLFPWLTVLENVTFGPRMQGANKAQLQREAENYLALVGLEGFQQHYPWQLSGGMKQRVALARAWLPN
PEVLLMDEPFGALDAQTRLMMQELLLSAWQKTGTTLLFVTHDVDEALFLADRVLVMSARPGRIAEAIPLPFGRERDIETL
AQHPDYAALKQRILHRVREEARRHLNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 5e-47 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PC1_1403 YP_003016985.1 ABC transporter-like protein NC_008702.1.4606598. Protein 6e-19 41