Gene Information

Name : PC1_1390 (PC1_1390)
Accession : YP_003016972.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1625451 - 1626167 bp
Length : 717 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA1515 ABC transporter ATP binding protein

DNA sequence : 
ATGTCTGTAGAGGTGAATGTGCAGGAAAAGGCACAGGCAGCGGAGGCGGTGATTGAAACTCGCCAGCTCTATAAACGCTT
TGGTCAGGTTACCGCGCTGGAGAACATCAATATCCGCATCGCGCGTGGCGAATTTGTCGCCATCATGGGCGCGTCTGGCT
CGGGTAAAACCACGCTGATGAATATTCTCACCTGTCTGGATACGGTGAGCGAAGGACAGGTATTGCTGGATGGTGTCGAC
GCGGCTGCGCTGGACGAGGAAGGACGGCGTCAGTTTCGTGCTGATAAGATTGGGTTGGTCTTTCAGCAGTTCCACCTGAT
TCCGTTTTTGACCGCGCTGGAGAACGTAATGCTGGCGCAGCATTACCACAGCGTGGTCGATGAAGCGGCGGCGCAGCGCG
TGCTGGATCAGGTTGGTTTGGCGCATCGCGTGAATCACTTACCGAGCCAGCTTTCCGGTGGTGAGCAGCAGCGTGTGTGT
ATCGCCCGTGCGTTGGTGAACGAGCCTCCTGTGATTTTCGCTGATGAACCAACGGGAAATCTGGACGAAGAGAACGAACA
ACGCGTGCTGGATCTGCTGAAAGATCTGCACCGGCAGGGACGTACCATTGTCATGGTGACACACAATCCTGAGCTGGGGC
GGTTTGCTGACCGCATTATCCGTCTGCAACACGGTAAGTATTTTGGTGAAGAGGTCAATCATCATGAAATGGCGTAA

Protein sequence : 
MSVEVNVQEKAQAAEAVIETRQLYKRFGQVTALENINIRIARGEFVAIMGASGSGKTTLMNILTCLDTVSEGQVLLDGVD
AAALDEEGRRQFRADKIGLVFQQFHLIPFLTALENVMLAQHYHSVVDEAAAQRVLDQVGLAHRVNHLPSQLSGGEQQRVC
IARALVNEPPVIFADEPTGNLDEENEQRVLDLLKDLHRQGRTIVMVTHNPELGRFADRIIRLQHGKYFGEEVNHHEMA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PC1_1390 YP_003016972.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-42 46
PC1_1390 YP_003016972.1 ABC transporter-like protein NC_012469.1.7685735. Protein 2e-40 45
PC1_1390 YP_003016972.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-32 44
PC1_1390 YP_003016972.1 ABC transporter-like protein CP001581.1.gene798.p Protein 8e-35 43