Gene Information

Name : PC1_1297 (PC1_1297)
Accession : YP_003016880.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : protein tyrosine phosphatase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : -
Position : 1514292 - 1514726 bp
Length : 435 bp
Strand : +
Note : PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: eca:ECA1418 protein-tyrosine-phosphatase

DNA sequence : 
ATGTTTGATTCAATACTTGTAGTTTGCGTAGGTAATATTTGCCGCTCCCCAACAGGGGAGCGTTTACTAAAACAAGCATT
GCCTACAAAGAAAATAGCGTCTGCAGGCCTAGGTGCTCTAGTAGGAAAGCCTGCAGATGAGACCGCCACTGATGTTGCAA
ATCAGCACAATCTTTCTCTGGATGGGCATGAGGCGCAGCAATTAACGTCAGCATTATGTCGGCAATATGACCTTATTCTG
GTTATGGAAAAAGGACATATTGATGGCGTATGTCGTATTGCGCCAGAAGTCCGAGGCAAGACAATGCTATTTGGCCGCTG
GCTTAATCAGCAAGAGATTGCTGATCCATACCGCAAAAGTCGTGAAGCATTTGAATTCGTTTACTTGCAACTTGAGCAGT
CTGCCCAGAAATGGGTGCAGGCATTAAGCCGTTAA

Protein sequence : 
MFDSILVVCVGNICRSPTGERLLKQALPTKKIASAGLGALVGKPADETATDVANQHNLSLDGHEAQQLTSALCRQYDLIL
VMEKGHIDGVCRIAPEVRGKTMLFGRWLNQQEIADPYRKSREAFEFVYLQLEQSAQKWVQALSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf40 AAO18065.1 Orf40 Not tested TTSS locus Protein 2e-40 62