Gene Information

Name : PC1_1296 (PC1_1296)
Accession : YP_003016879.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : polysaccharide export protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1596
EC number : -
Position : 1513147 - 1514283 bp
Length : 1137 bp
Strand : +
Note : PFAM: polysaccharide export protein; KEGG: eca:ECA1417 putative polysaccharide export protein

DNA sequence : 
ATGATAAAGCACAAGTTGAAATTGATACCAATAGCAGTGTCACTCGTTTTGCTGAGCGGCTGTACCATAATTCCCGGTAG
CCATCTTTCTACGAGTGGCAAAGAAGTTATTGAGCAGCAAGACGCTGATTTTAATATTGATAAATTAGTAAATGTTTATC
CACTAACACCTTATTTAGTGGATAAAATGCGGCCAAAGCCATTGATTGCGCAAACTAACCCTGCGCTAGAACGTGAACTA
CAACAGTATGAATACCGCATTGGTATTGGTGATGTCGTCATGGTTACCGTGTGGGATCACCCTGAGCTGACGACACCTGC
TGGTACATACCGTACTGCTGCGGATACGGGGAACTGGGTGCACTCTGATGGCACAATTTTCTATCCCTATATTGGTAAGG
TAAGAGTCGCGGGTAAAACGGTAACTGAGGTACGTGAAGAAATTACTTCTCGCTTAGCCACTTATATCGAGTCCCCGCAG
GTTGATGTCAGTATCGCTGCCTTCCGTTCTCAAAAGGCGTATGTAACCGGTGAAGTGAAAACCTCTGGTGAACAATCTAT
TACTAATGTGCCATTGACTATTCTGGATGCGATAAATAAAGCTGGGGGGTTAAGCGAAGATGCCGACTGGCGTAATATCG
TGTTGACACATAATGGCCAGGAAAGGCGAATCTCCCTTCAAGCGCTAATGCAAAATGGCGATCTATCCCAAAATACCCTG
CTTTACCCTGGTGATATCCTTTATATTCCCCGTAACGACGACTTGAAAGTATTCGTCATGGGGGAAGTCAAAAAACAAAC
CACGCTCAAAATGGATCGCAGCGGTATGACTTTGACCGAAGCACTTGGCAATGCTGAAGGCATGGATCAAACGTTGGCTG
ATGCAACTGGCGTGTTTGTTATTCGTCCGCTTCGAGGAACTCAGGGACCAAAACTAGCGAATATCTATCAGCTTAATGCC
GCCGACGCAACCTCGCTTGTTATGGGCGCTGAATTCCAATTGCAGCCTTATGATGTAGTTTATGTTACGACTGCACCGAT
TGCTCGTTGGAATCGCTTGATTTCGCAGCTTGCACCTACTATCTCCGCCTTTAATGATCTTAGTGAAGGTAGCTTGCGTG
TTCGCACCTGGCCATAG

Protein sequence : 
MIKHKLKLIPIAVSLVLLSGCTIIPGSHLSTSGKEVIEQQDADFNIDKLVNVYPLTPYLVDKMRPKPLIAQTNPALEREL
QQYEYRIGIGDVVMVTVWDHPELTTPAGTYRTAADTGNWVHSDGTIFYPYIGKVRVAGKTVTEVREEITSRLATYIESPQ
VDVSIAAFRSQKAYVTGEVKTSGEQSITNVPLTILDAINKAGGLSEDADWRNIVLTHNGQERRISLQALMQNGDLSQNTL
LYPGDILYIPRNDDLKVFVMGEVKKQTTLKMDRSGMTLTEALGNAEGMDQTLADATGVFVIRPLRGTQGPKLANIYQLNA
ADATSLVMGAEFQLQPYDVVYVTTAPIARWNRLISQLAPTISAFNDLSEGSLRVRTWP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf39 AAO18064.1 Orf39 Not tested TTSS locus Protein 9e-133 71