Gene Information

Name : PC1_1222 (PC1_1222)
Accession : YP_003016806.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3842
EC number : -
Position : 1428675 - 1429367 bp
Length : 693 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA1347 ABC transporter ATP-binding protein

DNA sequence : 
ATGACCACGGCTGAACTCACTACGCCTGCGGCGATTGCGATCGACAAACTGACCCACGCTTTTGCTGGGAAAACGGTGCT
CGATGCTATCAGCCTCAATGTGCCGAAAGGCACCATTCTGGCCTTGCTGGGACCTTCCGGCTGCGGCAAAAGCACGTTGC
TAAAATTGCTGGCCGGTCTGTTACAGCCGGACGCGGGCACCATTCATTTTGGCGATCGTCAGGTTGCCGGCCATCAACTA
TGCCTGCCACCAGAGCAGCGCAATCTTGGCATGGTCTTTCAGGACTATGCGCTTTGGCCGCATATGACCGTTGCACAAAA
TGTCGGGTTCCCGCTGATGATGAGGAAGGTTCCACGCGATATCTGCCGCCAACGCGTTGACGTCACGCTAGCGCGCGTCG
GTCTGGCTGATTTTGGCGATCGCAAACCGGCCGATTTATCCGGCGGCCAGCAACAGCGAGTCGCACTGGCGCGCGCCATT
ATCGCGGAGCCGAACATCCTGCTATTCGATGAACCGCTATCCAATCTCGACCGGGATCTACGTGAATCGCTTTGTCAGGA
GATGGCATCGCTCTTACGCCATCTTGGTACCACCGCCGTGTATGTCACCCACGACCGAGGCGAAGCCAACATACTGGCGC
ACCGTATTGTTCACATGTCGCAAGGCCACATTACTGATATCACCACACTTTAA

Protein sequence : 
MTTAELTTPAAIAIDKLTHAFAGKTVLDAISLNVPKGTILALLGPSGCGKSTLLKLLAGLLQPDAGTIHFGDRQVAGHQL
CLPPEQRNLGMVFQDYALWPHMTVAQNVGFPLMMRKVPRDICRQRVDVTLARVGLADFGDRKPADLSGGQQQRVALARAI
IAEPNILLFDEPLSNLDRDLRESLCQEMASLLRHLGTTAVYVTHDRGEANILAHRIVHMSQGHITDITTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 9e-25 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PC1_1222 YP_003016806.1 ABC transporter-like protein BAC0600 Protein 2e-24 43
PC1_1222 YP_003016806.1 ABC transporter-like protein NC_008702.1.4606598. Protein 5e-23 41