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Name : PC1_1214 (PC1_1214) Accession : YP_003016798.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : winged helix family two component transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 1417001 - 1417681 bp Length : 681 bp Strand : - Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: eca:ECA1338 DNA-binding transcriptional activator KdpE DNA sequence : TTGCAGGCCACTATTCTGATCGTTGAAGATGAAAAAGAGATCCGTCGTTTCGTGCGTCAGGCGCTGGAAGGCGAAGGCTG TCGCGTGTTTGACGCAGAAACAATGCAGCGCGGCTTGCTGGAAGCGGCCACGCGCAAACCCGATCTGATTATTCTCGATT TAGGCCTGCCGGACGGCGACGGTATCGACTACATCCGCGATTTACGTCAGTGGAGCAGCCTGCCCGTGATTGTGCTTTCC GCCCGTACCGACGAGCAGGATAAAATAGACGCGCTGGATGCGGGTGCCGATGATTATCTGACCAAACCGTTCGGCATCGG CGAGTTGCTGGCGCGATTGCGCGTCGCGCTGCGTCGCCACAGCCATACTCAGCAGGAAACGCCGCTGGTGAGTTTCGGTA CGATCACCGTAGATTTACTTAATCGGCAGGTGAACCGCGACGGTCAGGAACTGCACCTGACGCCCATCGAATTTCGCCTT CTGGCAACCTTGCTCGCCAGCCCCGGCAAAGTGCTGACGCAGCGCCAGCTTCTAACACAGGTCTGGGGGCCGAACGCCGT CGAGCACAGTCACTATCTGCGTATTTATATGGGGCACCTGCGCCAGAAGCTGGAAAGCGATCCGGCAAGACCGCGCCATC TCTTGACGGAAACCGCTATCGGTTATCGATTTATGCCGTAA Protein sequence : MQATILIVEDEKEIRRFVRQALEGEGCRVFDAETMQRGLLEAATRKPDLIILDLGLPDGDGIDYIRDLRQWSSLPVIVLS ARTDEQDKIDALDAGADDYLTKPFGIGELLARLRVALRRHSHTQQETPLVSFGTITVDLLNRQVNRDGQELHLTPIEFRL LATLLASPGKVLTQRQLLTQVWGPNAVEHSHYLRIYMGHLRQKLESDPARPRHLLTETAIGYRFMP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0571 | NP_814337.1 | DNA-binding response regulator | Not tested | Not named | Protein | 3e-26 | 43 |
| ef0091 | AAM75294.1 | EF0091 | Not tested | Not named | Protein | 2e-26 | 43 |
| kdpE | NP_370594.1 | transcriptional regulator kdpE | Not tested | Type-II SCCmec | Protein | 1e-17 | 42 |
| kdpE | NP_373306.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 1e-17 | 42 |
| kdeP | YP_190033.1 | DNA-binding response regulator KdeP | Not tested | Type-II SCCmec | Protein | 1e-17 | 42 |
| SH0031 | YP_251946.1 | hypothetical protein | Not tested | SCCmec | Protein | 3e-18 | 42 |
| kdpE | BAA82188.1 | KDP operon transcriptional regulatory protein KdpE | Not tested | Type-II SCCmec | Protein | 8e-18 | 42 |
| kdpE | YP_039536.1 | response regulator protein | Not tested | Type-II SCCmec | Protein | 1e-17 | 42 |
