Gene Information

Name : PC1_1061 (PC1_1061)
Accession : YP_003016646.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : ammonium transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0004
EC number : -
Position : 1236250 - 1237536 bp
Length : 1287 bp
Strand : +
Note : TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: eca:ECA1161 ammonium transporter

DNA sequence :
ATGAAAAAATTACTCTCTTCATTAGGTCTCGGTGTGGCGGCATTACTCCCGTCCTGGGCAATGGCTGCAACACCGACGAT
TGATAAAGCGGATAACGCTTTTATTATGATTTGTACCGCACTGGTACTCTTTATGACTATACCGGGCATTGCACTGTTTT
ATGGCGGTCTGATCCGTTCTAAGAACGTTCTGTCCATGATGACGCAGGTGAGCGTAACGTTCGCGATGGTCTGTATCCTG
TGGGTGGTTTACGGGTATAGCCTGGCCTTCAGCGAAGGTAACGCCTTCTTCGGTGGTTTCAGCACGTTTATGCTGAAAGG
CATCGGAATTGAATCCATTAGCGGAACCTTCTATCAGTTCGTGCACGTGGCGTATCAGGCTTCCTTTGCTTGTATCACCG
TTGCGCTGATTGTTGGTGCGATTGCTGAGCGTATCCGCTTCTCTGCTGTGCTGATTTTCGTTGCGCTGTGGCTGACGTTC
TCCTACCTGCCGATGACGCACATGGTGTGGGGCGGCGGTTATCTGGCTGCGGATGGCGCGCTGGACTTCGCTGGTGGTAC
GGTGGTTCACATCAACGCCGCAGTGGCTGGGTTGGTTGGTGCTTACCTGCTGGGCAAACGTGCTGGTTTTGGCAAAGAAG
CCTTCAAACCGCATAACCTGCCAATGGTATTTATCGGTACGGCGATTCTGTATATCGGCTGGTTTGGCTTCAACGCTGGT
TCCGCCGGTGCCGCGAACGGTATTGCTGCTCTGGCTTTCCTGAACACGGTTGTCGCGACGGCTGCTGCGATTCTGGCATG
GGTTGGCGGTGAGTGGATGGTACGCGGTAAACCTTCTCTGCTGGGCGCATGCTCCGGCTGTATCGCGGGTCTGGTAGCTA
TCACGCCAGCGGCAGGTACGGTGGGCGTGGGTGGTGCACTGATCATCGGTCTGGCTGGTGGCGTTGCAGGTCTGTGGGGC
GTAACGGTACTGAAAAGATGGCTGCGTGTGGATGACCCTTGTGATGTGTTCGGTGTTCACGGCGTGTGCGGTATCGTTGG
TTGTATCCTGACAGGTGTATTCACATCGGCTTCTCTGGGCGGTACTGGCTATGCTGAAGGCGTGACGATGGCGCATCAGG
TTTGGGTTCAACTGTTCAGCGTCATTGTTTGTCTGGTGTGGTCCGGCGTGGTGGCATTCGTTGCCTTCAAAGTAGCGGAT
ATGATTGTCGGCCTGCGTGTACCTGAAGATCAAGAGCGCGAAGGTCTGGATGTCAACAGCCATGGCGAGAGCGCTTACAA
CCAATAA

Protein sequence :
MKKLLSSLGLGVAALLPSWAMAATPTIDKADNAFIMICTALVLFMTIPGIALFYGGLIRSKNVLSMMTQVSVTFAMVCIL
WVVYGYSLAFSEGNAFFGGFSTFMLKGIGIESISGTFYQFVHVAYQASFACITVALIVGAIAERIRFSAVLIFVALWLTF
SYLPMTHMVWGGGYLAADGALDFAGGTVVHINAAVAGLVGAYLLGKRAGFGKEAFKPHNLPMVFIGTAILYIGWFGFNAG
SAGAANGIAALAFLNTVVATAAAILAWVGGEWMVRGKPSLLGACSGCIAGLVAITPAAGTVGVGGALIIGLAGGVAGLWG
VTVLKRWLRVDDPCDVFGVHGVCGIVGCILTGVFTSASLGGTGYAEGVTMAHQVWVQLFSVIVCLVWSGVVAFVAFKVAD
MIVGLRVPEDQEREGLDVNSHGESAYNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00287 YP_008207752.1 Ammonia permease Not tested AbaR25 Protein 6e-51 53
BJAB0868_00291 YP_008211617.1 Ammonia permease Not tested AbaR26 Protein 6e-51 53