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Name : PC1_1025 (PC1_1025) Accession : YP_003016610.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 3.5.4.26 Position : 1196772 - 1197908 bp Length : 1137 bp Strand : + Note : KEGG: eca:ECA1126 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminas DNA sequence : ATGAGCGTTTTTCAAGAAAACGGCCACTTGCCGCAGGATGAATTATACATGGCGCGTGCGTTAGAGTTGGCGCGTCGTGG CCGTTTTACGACGGCACCCAACCCCAATGTTGGCTGCGTGATCGTGCGCGATGGCGACATTGTCGGTGAAGGCTATCATT TCCGCGCAGGCGAACCTCATGCTGAGGTTCATGCGTTGAGAATGGCAGGGGAGCGCGCACGTGGTGCGACGGCCTATGTC ACGCTGGAGCCGTGCAGCCATCATGGCCGAACGCCGCCTTGTGCTGATGCGTTGGTTGCTGCTGGTGTCTCCCGTGTAGT TGCCGCGATGCAGGATCCCAATCCGCAGGTCGCGGGTCGTGGCTTACATCGTTTGCAGCAGGCAGGGATCGCTGTCAGCC ATGGTTTCATGATGGCTGAAGCAGAGAAAGTCAATGTAGGTTTCCTGAAGCGCATGCGGACAGGCTTTCCTTACGTGCAG CTCAAAATGGCGGCATCTTTGGATGGGCGTACTGCGATGGCCTCGGGAGAAAGTCAGTGGATTACCTCACCGCAGGCGCG TCAGGATGTGCAGCGTTTTCGTGCGGAGAGCGCAGCGATTTTGAGCAGTAGTGCGACGGTGCTGGCTGACGATCCTTCTC TTACGGTGCGGTGGTCAGAGCTGGGTGCCGATGTGCAGACTCGTTATTCAGAGGCGGATCTCAGGCAGCCCGTACGAGTG ATTGTGGACAGCCAGCGTCGTGTCACACCGCAGCATCGGATTGTTAGCCAACCGGGTGAGACTTGGTTGGCGCGGGTGCA GGCAGACGAACAGGCGTGGCCACAGGGCGTTGAGCAGGTCACCTTACCGCAGCACAATGGCGGCGTTGATCTGGTAGCGC TGATGATGGTGCTGGGGAGACGGCAGATTAACTCTGTCTGGGTTGAAGCCGGAGCCAGTCTGGCTGGTGCGCTGCTTAAT GCGGGTGTCGTTGATGAACTTATCGTTTATCTTGCGCCAAAACTGCTGGGTGAAAACGCCCGTTCGCTGTGCCTCTTGCC AGGGCTGGATCAACTGTCTCAGGCACCGGAATTTGACATCGCAGAGGTTCGGCAGATTGGTCCGGATTTGCGATTACGCC TGAAACCTAAATTCTGA Protein sequence : MSVFQENGHLPQDELYMARALELARRGRFTTAPNPNVGCVIVRDGDIVGEGYHFRAGEPHAEVHALRMAGERARGATAYV TLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPQVAGRGLHRLQQAGIAVSHGFMMAEAEKVNVGFLKRMRTGFPYVQ LKMAASLDGRTAMASGESQWITSPQARQDVQRFRAESAAILSSSATVLADDPSLTVRWSELGADVQTRYSEADLRQPVRV IVDSQRRVTPQHRIVSQPGETWLARVQADEQAWPQGVEQVTLPQHNGGVDLVALMMVLGRRQINSVWVEAGASLAGALLN AGVVDELIVYLAPKLLGENARSLCLLPGLDQLSQAPEFDIAEVRQIGPDLRLRLKPKF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 1e-62 | 49 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 1e-62 | 49 |
