|
Name : PC1_1018 (PC1_1018) Accession : YP_003016603.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : S-adenosylmethionine/tRNA-ribosyltransferase- isomerase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0809 EC number : - Position : 1189813 - 1190880 bp Length : 1068 bp Strand : + Note : TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: eca:ECA1119 S-adenosylmethionine:tRNA ribosyltransferase-isomerase DNA sequence : ATGCGTGTTGCCGATTTTTCGTTTGAACTTCCTGAATCATTGATTGCCCATTATCCACAAGCGGAACGCAGTGGTTGCCG TCTGCTATCGCTGGACGGGCCGACGGGAGATCTGACGCACGGCGTGTTTACCGATCTGCTGGATAAACTGAATCCCGGCG ATCTGCTGGTGTTCAACAATACGCGTGTGATTCCGGCTCGTCTCTTTGGCCGTAAAGTCAGTGGCGGCAAGCTGGAAGTG CTGGTGGAGCGCGTGCTGGATGATCATCGGGTGCTGGCGCACGTTCGGGCGTCAAAAGCGCCAAAACCGGGTACAGAGCT GCTGCTGGGCGATGATGAAAGCGTTAAAGCGACGATGGCGGCTCGCCACGATGCGCTGTTTGAACTGCATTTCGATGATT CCCGTGATGTCCTGTCGATCCTGAATGATATCGGCCACATGCCGCTGCCGCCTTACATCGACAGGCCTGATGAAGACGCC GATCGTGAGCTGTATCAGACGGTATATAGCCAGCGTCCGGGTGCCGTAGCGGCGCCGACAGCGGGTTTACATTTTGATGA GCCGATGCTGGCTGCGCTTCGCGAGAAGGGCATCGAAATGGCGTTTGTAACGCTGCACGTGGGGGCGGGGACTTTCCAGC CTGTTCGCGTCGATACGATCGAAGATCACATCATGCACGCCGAATATGCCGAAGTGCCGCAGGACGTTGTTGATGCCGTG CTGGCGTGCAAGGCGCGTGGAAACCGTGTGATAGCCGTCGGCACCACCTCGGTACGCTCACTGGAAAGTGCCGCACAGGC CAGCCAGAACGCGCCAATCGAACCGTTTTTCGGCGATACCAAAATTTTCATCTATCCAGGTTATCACTACCGCATTATCG ATGCGCTGGTGACCAACTTCCATTTACCCGAATCGACGTTAATCATGCTGGTGTCGGCCTTTGCTGGATACCAGAACACG ATGTCTGCCTACCGCCAAGCGGTGGCAGAGCAGTATCGTTTTTTCAGCTACGGTGATGCGATGTTTATTACGCACAACCC GATGGCCGAACAGGAAAAAGTGGGATAA Protein sequence : MRVADFSFELPESLIAHYPQAERSGCRLLSLDGPTGDLTHGVFTDLLDKLNPGDLLVFNNTRVIPARLFGRKVSGGKLEV LVERVLDDHRVLAHVRASKAPKPGTELLLGDDESVKATMAARHDALFELHFDDSRDVLSILNDIGHMPLPPYIDRPDEDA DRELYQTVYSQRPGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEDHIMHAEYAEVPQDVVDAV LACKARGNRVIAVGTTSVRSLESAAQASQNAPIEPFFGDTKIFIYPGYHYRIIDALVTNFHLPESTLIMLVSAFAGYQNT MSAYRQAVAEQYRFFSYGDAMFITHNPMAEQEKVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| queA | AAF71483.1 | QueA | Not tested | Hrp PAI | Protein | 1e-122 | 73 |
| queA | AAT96042.1 | QueA | Not tested | T-PAI | Protein | 5e-116 | 72 |
| queA | AAF71490.1 | QueA | Not tested | Hrp PAI | Protein | 3e-116 | 72 |
| queA | AAT96122.1 | QueA | Not tested | T-PAI | Protein | 4e-121 | 72 |
| queA | AAT96182.1 | QueA | Not tested | T-PAI | Protein | 3e-114 | 71 |
| queA | AAT96070.1 | QueA | Not tested | T-PAI | Protein | 6e-116 | 71 |
| queA | AAT96106.1 | QueA | Not tested | T-PAI | Protein | 6e-116 | 71 |
