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Name : Pjdr2_0084 (Pjdr2_0084) Accession : YP_003008851.1 Strain : Paenibacillus sp. JDR-2 Genome accession: NC_012914 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 87275 - 88792 bp Length : 1518 bp Strand : + Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: bsu:BSU00820 lysyl-tRNA synthetase DNA sequence : GTGGATCAGCAAAACACGGGAGTGGAACAAGAACAAGAACTAAGCGAACTACTGCAAATCCGCAGAGATAAATTGGACGA GCTCAGAGCACTTGGCGTTGACCCGTTTGGCGTCAAATTCGAGCGTACGCACAATGCGAAAGACATTGTGTCCGCTTATG AGGAGCTCAGCAAGGAAGAGCTGGAAGAGAAAGCAATCAAGGTAAGCGTTGCGGGCCGCATTATGCAAAAGCGCGGCATG GGCAAAGCTTCTTTTGCGCATATCCAGGATCTCTCCGGCAAAATCCAGATCTACGTTCGTAAAGATACGGTTGAAGCGAA CAAATATGCGGCATTTGAAATGCTTGATATCGGCGATATCGTCGGCATCACAGGCGTCGTGTTCAAGACGAACACCGGCG AAGTATCGGTAAAAGCTTATGAAGTGGAAGTGCTGACGAAGTCGCTGCTTCCGCTGCCTGATAAATATCACGGTCTGAAG GACGTAGAGCTGCGCTACCGCCAGCGTTATGTCGATCTGATCGTGAACCCGGACGTACAGCAAACCTTCATTACGCGTTC CCGCATTATTCAATCGATGCGTCGTTACCTCGACTCGAAGGGCTACCTCGAAGTGGAAACGCCAACTCTGCATTCCATTG CCGGCGGTGCTGCGGCTCGTCCGTTTATCACCCATCACAATGCGCTTGATATGCAGCTGTACATGCGTATCGCGATTGAG CTTCACCTGAAACGCCTTATCGTGGGCGGTCTGGAGAAAGTATACGAGATCGGCCGCGTTTATCGGAACGAAGGTATCTC CACGCGCCATAATCCGGAGTTTACCATGATCGAGCTGTATGAGGCATATGCCGATTACAAGGATATCATGGCTCTGACAG AGAACCTGATCGCCCATATCGCGCAAGAGGTTCTTGGCACGATGAAAATCTCGTACCAAGGTCAAGAGATCGACCTGACG CCGCAATGGCGCCGTGTTTCGATGGTGGACCTTGTTAAAGAGGTTACCGGCGTTGACTTCAGCGTAGAGATGAGCGATGA AGAAGCTCATGCCCTCGCGAAGGTGCATAAAGTGCCGGTTGAGCCTCATATGACATTCGGCCATATCCTGAATGCGTTCT TCGAAACGCATTGCGAACATACCTTGATTCAGCCGACATTCGTTACGGGACATCCGGTTGCGATCTCGCCGCTGGCGAAG AAGAATCCGGTAGATCCGCGCTTTACGGACCGCTTCGAGCTGTTTGTCGTAGCGCGCGAGCATGCGAACGCGTTCACCGA GCTGAACGATCCGATCGACCAGCGTCAGCGCTTTGAAGCTCAGCTTGTCGAGAAAGAACAAGGCAATGACGAAGCGCATG AGATGGATGACGACTTCATCCGCGCCCTCGAGTATGGCATGCCGCCAACAGGCGGACTTGGCATTGGCGTTGACCGCCTT GTTATGCTGCTTACCGATGCGCCTTCCATCCGCGACGTTCTGTTGTTCCCGCATATGCGCGAGCGTGCAGGCGAATAA Protein sequence : MDQQNTGVEQEQELSELLQIRRDKLDELRALGVDPFGVKFERTHNAKDIVSAYEELSKEELEEKAIKVSVAGRIMQKRGM GKASFAHIQDLSGKIQIYVRKDTVEANKYAAFEMLDIGDIVGITGVVFKTNTGEVSVKAYEVEVLTKSLLPLPDKYHGLK DVELRYRQRYVDLIVNPDVQQTFITRSRIIQSMRRYLDSKGYLEVETPTLHSIAGGAAARPFITHHNALDMQLYMRIAIE LHLKRLIVGGLEKVYEIGRVYRNEGISTRHNPEFTMIELYEAYADYKDIMALTENLIAHIAQEVLGTMKISYQGQEIDLT PQWRRVSMVDLVKEVTGVDFSVEMSDEEAHALAKVHKVPVEPHMTFGHILNAFFETHCEHTLIQPTFVTGHPVAISPLAK KNPVDPRFTDRFELFVVAREHANAFTELNDPIDQRQRFEAQLVEKEQGNDEAHEMDDDFIRALEYGMPPTGGLGIGVDRL VMLLTDAPSIRDVLLFPHMRERAGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 9e-119 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pjdr2_0084 | YP_003008851.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 5e-119 | 51 |
