|
Name : Pjdr2_0783 (Pjdr2_0783) Accession : YP_003009549.1 Strain : Paenibacillus sp. JDR-2 Genome accession: NC_012914 Putative virulence/resistance : Unknown Product : alpha amylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 911805 - 913556 bp Length : 1752 bp Strand : - Note : PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; SMART: alpha amylase catalytic sub domain; KEGG: bar:GBAA4230 alpha-amylase DNA sequence : ATGCTGCTGGAAGCGATCTATCACAGGCCGAAGCAAAACTGGGCTTACGCTTATAACCATACCACCCTGCATATCCGGAT TCGCACGAAAAAAAGCGATGCCCGGAGCGTGGAGCTCATTGCCGGAGACAAGTACAACTGGGCTGGAACGTTTACGATCA CCGACATGGCCGTACTATCCTCGGATGCGCTTTTTGATTACTGGGAAGCTTCCATCACCCCTCCCTTCCGCCGGCTTCGG TATGCGTTCCGCCTGACGGATGGCGATGAAACGGTGATTATGACGGAGAGCGGCTTTCCGGCCGAGCTGCCGGATAATCC AAATACGTTTTTCGACTTCCCTTACATTAACCCGGTGGATGTGTTCTCCCCTCCGGCTTGGGTGAAGGACGCGGTGTTCT ATCAGATCTTCCCGGAGCGTTTCGCAAACGGTGATCCTTCGCTGAACCCGGAAACAACGGAAGCCTGGGGCGGCAAACCA ACGCCAACAAATTTCTTCGGGGGAGACCTGCAAGGCGTGCTGGATCATCTGGACTATTTGGCCGAGCTTGGCATTAACGC GGTCTATTTCACCCCGCTGTTTGAAGCAACAACCAATCATAAATACGATACCGAGAACTATATGCAGGTGGACCGTCATT TTGGCACAAACGAGAAGCTGAAGGAGCTAGTCGAGGAATGTCACAAGCGCGGAATCCGGTTGCTGCTGGATGCGGTGTTT AACCATGCGGGCCGTACGTTCCCTCCTTTTGCGGATCTGCTTAAAAATGGCGAGAAATCCGTCTATGCGAACTGGTTCCA TGTGCGGGAATGGCCGCTCCGGATTGAGGACGGCATCCCTACTTACGAGACATTTGCCTTTGAGCCGATGATGCCTAAGC TGAATACGGAAAATCCGGACGTGAAAGCCTACTTATTCAATGTGGCGCGTTATTGGATTGAGAAAATCGGAATCGACGGC TGGCGGCTTGACGTGGCCAACGAGGTGGATCATCAGTTCTGGCGGGAGTTCCGCCAAGCAGTGAAATCCGTAAAGCCGGA TGCGTATATCCTCGGCGAGATCTGGCATGACGCGATGATGTGGCTGGAGGGCGACCAGTTCGACGCGGTGATGAACTATC CGTTTACGAATGCGGTGCTCGACTTCTTCGGACATCAGACGATTAACGGCAAAACCTTTGCCGATGCCATTGGCCGGCAG CTTGCCGCTTATCCGCAGCAGGTAACGGAGACGGCATTCAACCTGCTGGACAGCCATGATACTCCGCGCCTACTGACGAT TTGCGGCGATGACGCGGATTCGATGAAGCTGGCGGCTCTGTTCCAGCTGACCTATCCGGGTACGCCGTGCATTTATTACG GCGATGAAGTAGGCATGGACGGCGATGGCGATCCCGACTGCCGGAAATGCATGGTGTGGGAACCGGAGCAGCAGGATCGG GAGCTGCTCGCATTCTATAAGCAGGCGCTTGCGCTGCGGAGCAAGCACGCCGCGCTGCGCAGCGCAGACATCCGCTTCCT GCAGGCAGCGGATGGCGAAGACGGCGGCGTTATCGTATACGAACGCCGCGAGGGGGACGAGCGCATCCTCGTCGCGATGA ATGCGCGAGGGCGCGAGGCCGTTGCCGCCGTGCCATCCGGCGGCAGCTGGGTGTCGCTGCTCGGCGATGAGCAGCGGCTT GAGCCGGCAGCCGGGAAGCTGCAGCTGCGGCTCCCGGGGTACGGCTACGGTATTTGGAAGCAGCTTGTCTAA Protein sequence : MLLEAIYHRPKQNWAYAYNHTTLHIRIRTKKSDARSVELIAGDKYNWAGTFTITDMAVLSSDALFDYWEASITPPFRRLR YAFRLTDGDETVIMTESGFPAELPDNPNTFFDFPYINPVDVFSPPAWVKDAVFYQIFPERFANGDPSLNPETTEAWGGKP TPTNFFGGDLQGVLDHLDYLAELGINAVYFTPLFEATTNHKYDTENYMQVDRHFGTNEKLKELVEECHKRGIRLLLDAVF NHAGRTFPPFADLLKNGEKSVYANWFHVREWPLRIEDGIPTYETFAFEPMMPKLNTENPDVKAYLFNVARYWIEKIGIDG WRLDVANEVDHQFWREFRQAVKSVKPDAYILGEIWHDAMMWLEGDQFDAVMNYPFTNAVLDFFGHQTINGKTFADAIGRQ LAAYPQQVTETAFNLLDSHDTPRLLTICGDDADSMKLAALFQLTYPGTPCIYYGDEVGMDGDGDPDCRKCMVWEPEQQDR ELLAFYKQALALRSKHAALRSADIRFLQAADGEDGGVIVYERREGDERILVAMNARGREAVAAVPSGGSWVSLLGDEQRL EPAAGKLQLRLPGYGYGIWKQLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SPN23F_09660 | YP_002510949.1 | alpha-amylase | Not tested | PPI-1 | Protein | 5e-119 | 45 |
