Gene Information

Name : Pjdr2_0731 (Pjdr2_0731)
Accession : YP_003009497.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 848813 - 850576 bp
Length : 1764 bp
Strand : -
Note : TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; KEGG: bha:BH1933 thiamine biosynthesis protein ThiC

DNA sequence :
ATGCCGATTTTATCAACGCCGCTACCGGGCAGCCGCAAAACGTATGTGAGAGGATCGAGGGAAGATATTCGGGTTCCCAT
GCGCGAAATCGTATTATCCGACAGTCGGGGAAAAGACGGACAGCCGCAGCCCAACGAGCCAGTGCGGGTGTATGACTCAA
GCGGCCCGTACACGGACGAGTCCTACGAGGCCGATGTGCGTAAAGGACTCCCTGTCCTGCGCGGCGGGTGGATCAGCGAC
CGCGGCCACACGGAAGCTTACGACGGCCGGATCATTAAGCCGGAAGATAACGGATTTTCGGACGAGGAACGAGCAAAGAA
GAATGGCGAGGAAATTTTCCCTTGCCTGAATCACCGGCCTCTTCACGCAAAACCGGGGAGAAACGTCACGCAGCTTCACT
ACGCCCGCAAAGGCATCGTGACTCCGGAAATGGAGTTTATTGCGATTCGCGAAGGGGTTGATCCGGAGCTGGTCCGTTCG
GAAGTGGCCCGCGGGCGCGCGGTTATACCGGCCAATATCAACCATCCCGAACTCGAGCCGATGATCATCGGGAGCCGTTT
CCATGTGAAGATTAACGCCAACATCGGCAATTCGGCCGTTGCGTCCTCCATTGAAGAGGAAGTCGAGAAAATGACGTGGG
CAACCCGCTGGGGAGCGGATACGATTATGGACTTGTCCACGGGAAAAAACATCCATACGACACGCGAATGGATTATTCGC
AACTCTTCCGTTCCCGTTGGCACGGTGCCGATTTACCAGGCGCTTGAAAAAGTGAACGGAAAAGCGGAAGACCTGAACTG
GGAAGTGTTCCGCGATACGTTAATCGAACAAGCTGAACAAGGCGTCGATTATTTCACTATTCATGCCGGCGTGCTGCTGC
GTTACATCCCGCTTACGGCCAAACGCGTTACCGGCATCGTTTCCCGGGGCGGCTCCATCATGGCTGCCTGGTGTCTCGCC
CACCACAAGGAAAACTTCCTCTACGCCCACTTTGAAGAAATATGCGGGATTATGAAAGCCTACGACGTGTCGTTTTCGCT
TGGAGACGGCCTTCGTCCAGGCTCCATTGCGGATGCTAACGACGAAGCTCAATTCGCGGAACTGAGAACGCTTGGAGAAT
TGACGGAAATCGCTTGGAAGCATGATGTTCAGGTGATGATCGAAGGCCCGGGCCACGTTCCCATGCATTTGATCAAAGAA
AACGTCGACCTCCAAATGGAGATCTGCAAGGAAGCGCCGTTTTATACCCTGGGGCCGCTCACGACGGACATCGCACCTGG
CTACGACCATATCACATCGGCGATAGGAGCAGCGATGATCGGTTGGTTCGGAACGGCGATGTTATGCTACGTAACGCCTA
AAGAACATCTGGGCCTCCCCAATAAAGAAGACGTTAAAGACGGTGTCATCGCCTACAAAATAGCAGCGCATGCCGCAGAC
CTTGCCAAAGGACATCCAATGGCGAAACTCCGGGACGACGCCCTGTCGAAGGCAAGGTTCGAATTCCGATGGCGCGACCA
GTTCCATTTGTCCCTTGATCCCGAACGGGCGATCGCCTACCATGACGAGACGCTGCCCGCCGAGGCGGCGAAAACAGCGC
ACTTCTGCTCGATGTGCGGACCAAAGTTCTGCAGCATGCGGATTACGCAAGACATCCGGGAATATGCGGAAGCACGCGGA
CTGAATAACGAAGCGGCTTTGGAAGCCGGAATGAAGGAGCAGGCGGATTCGTTCAAAATGTCCGGGAGCAAGCTATACGG
CTGA

Protein sequence :
MPILSTPLPGSRKTYVRGSREDIRVPMREIVLSDSRGKDGQPQPNEPVRVYDSSGPYTDESYEADVRKGLPVLRGGWISD
RGHTEAYDGRIIKPEDNGFSDEERAKKNGEEIFPCLNHRPLHAKPGRNVTQLHYARKGIVTPEMEFIAIREGVDPELVRS
EVARGRAVIPANINHPELEPMIIGSRFHVKINANIGNSAVASSIEEEVEKMTWATRWGADTIMDLSTGKNIHTTREWIIR
NSSVPVGTVPIYQALEKVNGKAEDLNWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRVTGIVSRGGSIMAAWCLA
HHKENFLYAHFEEICGIMKAYDVSFSLGDGLRPGSIADANDEAQFAELRTLGELTEIAWKHDVQVMIEGPGHVPMHLIKE
NVDLQMEICKEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTPKEHLGLPNKEDVKDGVIAYKIAAHAAD
LAKGHPMAKLRDDALSKARFEFRWRDQFHLSLDPERAIAYHDETLPAEAAKTAHFCSMCGPKFCSMRITQDIREYAEARG
LNNEAALEAGMKEQADSFKMSGSKLYG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 69
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 69
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 65