Gene Information

Name : Pjdr2_6052 (Pjdr2_6052)
Accession : YP_003014742.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 6931308 - 6932060 bp
Length : 753 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bar:GBAA5085 ABC transporter ATP-binding protein

DNA sequence : 
ATGGAGATGGAGACGGTTATCCAGACAAAAAACTTATCAAAGAGCTACGGGGCTACTCCCGTATTGAAAAACATTGATCT
GACGGTCCAGCCCGGCGAGCTTACGGCGATTATGGGTCCTTCGGGATCGGGCAAATCAACGCTGATGAACGTGCTTTCCA
CGATTGATCGGTTCAGCGGGGGCGAGGTATGGATTGAGGGGAAATCGCTTCTTGATATGAAGAAGAAGTCGCTTCGTCAA
TTCCGCCAGGAGCGGATGGGGTTTATTTTCCAGGATTATAATCTGCTCGACACGCTGACGGTGAAAGAAAATATCCTGCT
GCCCCTGTCGCTGCGCCAGTTCAAGGCGACGGAGATGGAGGAGCGGCTCATGCCGATTATCGAGGCGCTCCACATTGAAG
GGCTGCTGGCGAAGTACCCAAGCGAGATTTCCGGCGGGCAGAAGCAGCGCGTAGCCTCGGCGCGGGCGATTATTACGGAG
CCGGCGATCGTATTTGCCGATGAGCCGACGGGCGCGCTCGATTCGCGCTCGGCGACCCAACTGCTTGAGCAGCTTGTATC
GCTTAACGCGGCTTTTAACACAACCATACTGATGGTTACGCATGACAGCTATGCGGCGAGCTACTGCAAGCGGGTTGTAT
TCCTCAGGGACGGGGCGGTCGTAAGCGAGATTTACGCGGGTGAACAGAGCCAGAAGACTTTCTACGAGCGCATTCTGGAG
ACGCAAAGCCTCATAGGGGGCAAGCTGCGATGA

Protein sequence : 
MEMETVIQTKNLSKSYGATPVLKNIDLTVQPGELTAIMGPSGSGKSTLMNVLSTIDRFSGGEVWIEGKSLLDMKKKSLRQ
FRQERMGFIFQDYNLLDTLTVKENILLPLSLRQFKATEMEERLMPIIEALHIEGLLAKYPSEISGGQKQRVASARAIITE
PAIVFADEPTGALDSRSATQLLEQLVSLNAAFNTTILMVTHDSYAASYCKRVVFLRDGAVVSEIYAGEQSQKTFYERILE
TQSLIGGKLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-29 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 41
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 1e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pjdr2_6052 YP_003014742.1 ABC transporter NC_012469.1.7686878. Protein 1e-35 43