Gene Information

Name : Pjdr2_5991 (Pjdr2_5991)
Accession : YP_003014681.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit beta
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 6862841 - 6864871 bp
Length : 2031 bp
Strand : +
Note : TIGRFAM: K+-transporting ATPase subunit beta; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: baa:BA_1325 E1-E2 ATPase

DNA sequence :
GTGACCACACAACGTAAATCCATGCTGACCTCGGCGATTATAAGTCGCGCGGTGAAGGACAGCTTTCTGAAATTAAATCC
GCTGACCATGATGAGAAATCCCGTCATGTTTGTCGTAGAGGTCGGCACGCTTGTCGTCCTGCTGATGACGGTCTTCCCCG
GCTACTTCGGAACGGAGGGCCGGACCGGATTCAATCTGACGGTCTTTCTGATCCTGCTGTTCACCGTCCTGTTCGCCAAC
TTCGCGGAAGCGCTGGCCGAAGGACGGGGCAAAGCCCAGGCGGATTCGCTCAAGAAGAGCAAAAAGGATATTACGGCAAA
CAAAGTAACCGGCCAGACAATAAAACAAGTGTCGTCAACCGAGCTCCGCAAAGGCGATATCGTCGTCGTCTCCGAAGGAG
AAATGATTCCCGGCGACGGCGAGATCATCGAAGGCCTTGCCTCTGTCGACGAGTCGGCAATCACCGGCGAATCTGCACCG
GTGATCAAGGAAGCCGGAGGCGACTTCAGCTCGGTAACGGGCGGTACCCGCGTTGTCAGTGACCGGATCAAGGTCCGGAT
TATAAGCGATCCCGGCGAATCGTTTATCGATCGTATGATCTCCCTTGTTGAAGGGGCGAAACGCCAAAAGACGCCTAACG
AGCTGGCGCTGAACACGCTGCTTACCAGCCTGACGCTGATCTTCCTGATTGTTGTGGTTACCCTTGCTCCAATCGCCAAA
TACGTTGGCGTAGAGCTTGATATCCCGGTGCTTATCGCCCTGCTGGTCTGTCTCATTCCGACCACCATCGGCGGTCTGCT
GTCAGCCATCGGAATCGCCGGCATGGACCGCGTCACGCAGTTCAACGTGCTGGCCATGTCCGGTAAAGCGGTAGAAGCAG
CCGGCGACATAAATACGATGATTCTGGATAAGACCGGTACAATCACGTACGGCAACCGGATGGCCAGCGACTTCCTGCCT
GTCAAAGGCGTAAACGTTCAAGAGCTTGGCGAGTGGGCGGCGCTCAGTTCGTCCAAAGACGAGACGCCCGAGGGCCGTTC
CGTCCTGGAGCTGATGAAGACCAAACAGCTGAGTTATCAATCCCCGCTTGCCGAGAACGCGCAGATTATTGCGTTTACGG
CCGAGACGCGGATGAGCGGCCTGGATCTTCCGGACGGACGGAAAGTCCGCAAAGGCGCCGTTGACGCCGTGAAGAAATGG
GTAGCTTCCCAAGGAGGCACCGTCCCGTCCGATCTCGACGCTACCGGCGAAGGAGTTGCCGTGCTTGGCGGTACGCCGCT
CGCCGTGGCGGTTGATAGCCGCATCTACGGGATTATTTATTTAAAGGATACCGTGAAGCCGGGCATGCAGGAGAGATTCG
AGCAGCTTCGCCGCATGGGGATCAAGACGATTATGTGTACCGGCGACAATCCGCTGACAGCCGCAACGATTGCCCGCGAA
GCCGGGGTTGACGATTTCGTAGCGGAGAGTAGGCCCGAGGATAAAATCGCGCTGATCCGCCGCGAGCAGGCGGAAGGCAG
CCTTGTTGCGATGACGGGCGACGGGACGAACGACGCTCCAGCGCTTGCCCAAGCTGACGTTGGTCTTGCCATGAACAGCG
GTACGGTTGCCGCGAAGGAAGCGGCCAATATGATCGACCTGGATTCGGACCCGTCAAAAATTATCGAGGTGGTTGCGATA
GGCAAGCAGCTCCTAATGACGCGCGGCGCGCTTACGACCTTTAGTATCGCGAACGATATCGCCAAATATTTCGCCATTAT
TCCGGCCATGTTTATGATCGCTATCCCTCAGATGGACGCCCTGAACATTATGAAGCTGGGCTCGCCTTCTTCGGCCATTC
TGTCCGCGCTTATCTTTAACGCGATCATCATTCCGCTGCTCATTCCGCTTGCTATGCGCGGGGTGCAGTACAAACCGATG
AGCGCGTCGAAGCTGTTAAGCAAAAACCTGCTGATCTACGGATTTGGCGGCGTCCTGGCCCCGTTTATCGGCATTAAGCT
GATCGACCTGCTTGTTCATGTATGGATATAG

Protein sequence :
MTTQRKSMLTSAIISRAVKDSFLKLNPLTMMRNPVMFVVEVGTLVVLLMTVFPGYFGTEGRTGFNLTVFLILLFTVLFAN
FAEALAEGRGKAQADSLKKSKKDITANKVTGQTIKQVSSTELRKGDIVVVSEGEMIPGDGEIIEGLASVDESAITGESAP
VIKEAGGDFSSVTGGTRVVSDRIKVRIISDPGESFIDRMISLVEGAKRQKTPNELALNTLLTSLTLIFLIVVVTLAPIAK
YVGVELDIPVLIALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVLAMSGKAVEAAGDINTMILDKTGTITYGNRMASDFLP
VKGVNVQELGEWAALSSSKDETPEGRSVLELMKTKQLSYQSPLAENAQIIAFTAETRMSGLDLPDGRKVRKGAVDAVKKW
VASQGGTVPSDLDATGEGVAVLGGTPLAVAVDSRIYGIIYLKDTVKPGMQERFEQLRRMGIKTIMCTGDNPLTAATIARE
AGVDDFVAESRPEDKIALIRREQAEGSLVAMTGDGTNDAPALAQADVGLAMNSGTVAAKEAANMIDLDSDPSKIIEVVAI
GKQLLMTRGALTTFSIANDIAKYFAIIPAMFMIAIPQMDALNIMKLGSPSSAILSALIFNAIIIPLLIPLAMRGVQYKPM
SASKLLSKNLLIYGFGGVLAPFIGIKLIDLLVHVWI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-155 61
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-155 61
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-155 61
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-155 61
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 5e-155 61
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 8e-156 61
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 1e-132 57
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 1e-132 57