Gene Information

Name : Pjdr2_5990 (Pjdr2_5990)
Accession : YP_003014680.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase A
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2060
EC number : 3.6.3.12
Position : 6861137 - 6862816 bp
Length : 1680 bp
Strand : +
Note : catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions

DNA sequence :
ATGGATATTTTACAGCTCATCATCGTGGTTGGCGTGCTTATTCTGCTCGTCAAACCGCTCGGAACGTATGTATATCACGT
GTACTCGGATCAACCGAACCGGACCGACCGCCTATTTGGCGGCATCGAACGGTTCATTTATAAAGTGATAGGACTGAAAT
CGCGCGAGGGCATGACCTGGAAAAAGTACGCGCTAAGCTTTCTGCTTACGAATATCGTGCTTGTCGCGCTCAGTTATCTA
ATTCTGCGTCTGCAAGGCAGCCTTTCGGGCAACCCCAACGGCATTGGCGCTATGGAAGAGACGCTGTCGTTCAATACCGT
TATCAGCTTTATTACGAATACGAACCTGCAGCACTACAGCGGCGAGACCGGGCTGTCCTATTTTTCGCAGATGGCCGTCA
TCATGATGATGATGTTCACCTCGGCGGCTACCGGCTTCTCGGTTGCGATTGCTTTTATTCGCGGCTTAACGAGCAGGGGC
AGCACAATCGGCAACTTCTTCAGCGATTTCGTGAAATCCCATACGCGGATTTTCCTGCCGCTCGCAACGCTTATTACGCT
GGTTCTTGTGGCTCTTCACGTACCGCAGACGCTGCAGCCTAACGTAACGGCAACAACGCTGGAAGGGGCAGCGCAAAGCA
TCGCCATCGGCCCGGTTGCGTCGCTTGAATCGATTAAACATTTAGGAACCAACGGCGGCGGTTTCTTTGGCGTCAACTCG
GCGCATCCGTTCGAGAATCCAAACCCGCTCACGAATGTGATCGAGATTCTGTCCATGTGGGCGCTGCCTGCCAGTCTTCC
TTATGTATACGGCCGCTTTGCCGGTAACCGCAAGCAAGGCTGGGTTGTGTTTGGCGCCATGATGTCGCTGTTCCTGGTTT
TCCTTGCGACGGTCTACACAGCTGAGCTGCATGGCAATCCGGTAATGAACAACCTTGGCGTAGACGCCTCGCAAGGCAGC
ATGGAGGGCAAGGAAGTCCGGTTTGGCATTGCCCAATCCTCCCTCTTTACGGCGGTGACTACGGCGGCTACTACCGGCTC
AGTCAACAATATGCATGACACGCTGACCCCGATCGGCGGTCTTGTCCCGCTGGCGGAAATGATGCTGAACGTCGTGTTTG
GCGGCAAAGGCGTTGGCCTCGTCAATATGCTGATGTATGCCATTCTTGCCGTCTTTATCGCCGGATTAATGGTCGGTCGG
ACACCGGAGTTTCTCGGACGGAAAATCGAGCCGAAGGAAATGAAGCTGATTGCGATCGCGATTCTCGTCCATCCGTTTAT
CATTCTGGCGCCAACCGCTATTGCTTTCTTGACGGATCTGGGCCAGGGAGCCATCACGAATCCCGGCTTCCACGGCATCT
CGCAGGTGCTCTATGAATACACCTCGTCAGCGGCGAATAACGGCTCCGGTTTTGAAGGTCTTGCCGACAATACGCCGTTC
TGGAACATTACAACCGGACTCGTCATGCTGCTTGGACGGTATGTTTCGATGATTGCCATGCTGGCTGTAGCCGGATCCCT
GGTCCGTAAAAAGCCCGTACCGGAGACGATCGGCACATTCCGGACGGACAACGTGCTGTTTGGCGGAATTCTTGTAGGAA
CCGTAGTTATTGTTGGCGCGCTTACGTTCCTGCCTGCCGTCGTGCTTGGACCTATTGCAGAGCATTTAACGATTCGCTAA

Protein sequence :
MDILQLIIVVGVLILLVKPLGTYVYHVYSDQPNRTDRLFGGIERFIYKVIGLKSREGMTWKKYALSFLLTNIVLVALSYL
ILRLQGSLSGNPNGIGAMEETLSFNTVISFITNTNLQHYSGETGLSYFSQMAVIMMMMFTSAATGFSVAIAFIRGLTSRG
STIGNFFSDFVKSHTRIFLPLATLITLVLVALHVPQTLQPNVTATTLEGAAQSIAIGPVASLESIKHLGTNGGGFFGVNS
AHPFENPNPLTNVIEILSMWALPASLPYVYGRFAGNRKQGWVVFGAMMSLFLVFLATVYTAELHGNPVMNNLGVDASQGS
MEGKEVRFGIAQSSLFTAVTTAATTGSVNNMHDTLTPIGGLVPLAEMMLNVVFGGKGVGLVNMLMYAILAVFIAGLMVGR
TPEFLGRKIEPKEMKLIAIAILVHPFIILAPTAIAFLTDLGQGAITNPGFHGISQVLYEYTSSAANNGSGFEGLADNTPF
WNITTGLVMLLGRYVSMIAMLAVAGSLVRKKPVPETIGTFRTDNVLFGGILVGTVVIVGALTFLPAVVLGPIAEHLTIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0070 YP_039538.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 2e-111 52
truncated-kdpA NP_370596.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 2e-111 52
kdpA NP_373308.2 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 2e-111 52
kdpA YP_190030.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 2e-111 52
kdpA YP_251948.1 potassium-transporting ATPase subunit A Not tested SCCmec Protein 6e-112 52
unnamed BAB43902.1 potassium-transporting ATPase(A chain) Not tested Type-II SCCmec Protein 1e-111 52