|
Name : Pjdr2_5990 (Pjdr2_5990) Accession : YP_003014680.1 Strain : Paenibacillus sp. JDR-2 Genome accession: NC_012914 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase A Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2060 EC number : 3.6.3.12 Position : 6861137 - 6862816 bp Length : 1680 bp Strand : + Note : catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions DNA sequence : ATGGATATTTTACAGCTCATCATCGTGGTTGGCGTGCTTATTCTGCTCGTCAAACCGCTCGGAACGTATGTATATCACGT GTACTCGGATCAACCGAACCGGACCGACCGCCTATTTGGCGGCATCGAACGGTTCATTTATAAAGTGATAGGACTGAAAT CGCGCGAGGGCATGACCTGGAAAAAGTACGCGCTAAGCTTTCTGCTTACGAATATCGTGCTTGTCGCGCTCAGTTATCTA ATTCTGCGTCTGCAAGGCAGCCTTTCGGGCAACCCCAACGGCATTGGCGCTATGGAAGAGACGCTGTCGTTCAATACCGT TATCAGCTTTATTACGAATACGAACCTGCAGCACTACAGCGGCGAGACCGGGCTGTCCTATTTTTCGCAGATGGCCGTCA TCATGATGATGATGTTCACCTCGGCGGCTACCGGCTTCTCGGTTGCGATTGCTTTTATTCGCGGCTTAACGAGCAGGGGC AGCACAATCGGCAACTTCTTCAGCGATTTCGTGAAATCCCATACGCGGATTTTCCTGCCGCTCGCAACGCTTATTACGCT GGTTCTTGTGGCTCTTCACGTACCGCAGACGCTGCAGCCTAACGTAACGGCAACAACGCTGGAAGGGGCAGCGCAAAGCA TCGCCATCGGCCCGGTTGCGTCGCTTGAATCGATTAAACATTTAGGAACCAACGGCGGCGGTTTCTTTGGCGTCAACTCG GCGCATCCGTTCGAGAATCCAAACCCGCTCACGAATGTGATCGAGATTCTGTCCATGTGGGCGCTGCCTGCCAGTCTTCC TTATGTATACGGCCGCTTTGCCGGTAACCGCAAGCAAGGCTGGGTTGTGTTTGGCGCCATGATGTCGCTGTTCCTGGTTT TCCTTGCGACGGTCTACACAGCTGAGCTGCATGGCAATCCGGTAATGAACAACCTTGGCGTAGACGCCTCGCAAGGCAGC ATGGAGGGCAAGGAAGTCCGGTTTGGCATTGCCCAATCCTCCCTCTTTACGGCGGTGACTACGGCGGCTACTACCGGCTC AGTCAACAATATGCATGACACGCTGACCCCGATCGGCGGTCTTGTCCCGCTGGCGGAAATGATGCTGAACGTCGTGTTTG GCGGCAAAGGCGTTGGCCTCGTCAATATGCTGATGTATGCCATTCTTGCCGTCTTTATCGCCGGATTAATGGTCGGTCGG ACACCGGAGTTTCTCGGACGGAAAATCGAGCCGAAGGAAATGAAGCTGATTGCGATCGCGATTCTCGTCCATCCGTTTAT CATTCTGGCGCCAACCGCTATTGCTTTCTTGACGGATCTGGGCCAGGGAGCCATCACGAATCCCGGCTTCCACGGCATCT CGCAGGTGCTCTATGAATACACCTCGTCAGCGGCGAATAACGGCTCCGGTTTTGAAGGTCTTGCCGACAATACGCCGTTC TGGAACATTACAACCGGACTCGTCATGCTGCTTGGACGGTATGTTTCGATGATTGCCATGCTGGCTGTAGCCGGATCCCT GGTCCGTAAAAAGCCCGTACCGGAGACGATCGGCACATTCCGGACGGACAACGTGCTGTTTGGCGGAATTCTTGTAGGAA CCGTAGTTATTGTTGGCGCGCTTACGTTCCTGCCTGCCGTCGTGCTTGGACCTATTGCAGAGCATTTAACGATTCGCTAA Protein sequence : MDILQLIIVVGVLILLVKPLGTYVYHVYSDQPNRTDRLFGGIERFIYKVIGLKSREGMTWKKYALSFLLTNIVLVALSYL ILRLQGSLSGNPNGIGAMEETLSFNTVISFITNTNLQHYSGETGLSYFSQMAVIMMMMFTSAATGFSVAIAFIRGLTSRG STIGNFFSDFVKSHTRIFLPLATLITLVLVALHVPQTLQPNVTATTLEGAAQSIAIGPVASLESIKHLGTNGGGFFGVNS AHPFENPNPLTNVIEILSMWALPASLPYVYGRFAGNRKQGWVVFGAMMSLFLVFLATVYTAELHGNPVMNNLGVDASQGS MEGKEVRFGIAQSSLFTAVTTAATTGSVNNMHDTLTPIGGLVPLAEMMLNVVFGGKGVGLVNMLMYAILAVFIAGLMVGR TPEFLGRKIEPKEMKLIAIAILVHPFIILAPTAIAFLTDLGQGAITNPGFHGISQVLYEYTSSAANNGSGFEGLADNTPF WNITTGLVMLLGRYVSMIAMLAVAGSLVRKKPVPETIGTFRTDNVLFGGILVGTVVIVGALTFLPAVVLGPIAEHLTIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| truncated-kdpA | NP_370596.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-111 | 52 |
| kdpA | NP_373308.2 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-111 | 52 |
| kdpA | YP_190030.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-111 | 52 |
| kdpA | YP_251948.1 | potassium-transporting ATPase subunit A | Not tested | SCCmec | Protein | 6e-112 | 52 |
| unnamed | BAB43902.1 | potassium-transporting ATPase(A chain) | Not tested | Type-II SCCmec | Protein | 1e-111 | 52 |
| SAR0070 | YP_039538.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-111 | 52 |
