Gene Information

Name : Pjdr2_5945 (Pjdr2_5945)
Accession : YP_003014635.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 6814772 - 6815650 bp
Length : 879 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU33270 hypothetical protein

DNA sequence : 
TTGATACATTGCGAAGGTTTGGTCAAAATCTACAAGGCAAACGAACTGGAAGTATTTGCGCTGCAAGGCCTTGACCTCCA
TGTGGAGGCCGGAGAGCTGATGGCGATTATCGGCAACAGCGGCAGCGGCAAATCCACGCTTCTGAATATGCTGGGCGGGC
TTGACCGCCCGACCGCAGGCAGTCTGACGGTGGACGGCAAGGATCTGATGAAGTTCAAGGAACGGGATTTCGTCAAATAT
AAGCGGGAAAGCGTAGGCTTCGTCTGGCAAAATAACGCCAGAAACCTGATTCCTTACCTGACCGCGCAGCAAAATGTCGA
GCTGCCGATTCTATTGAACGGCCGCCGCAAGCAGCAACGGGCGCGCGAGCTACTCGAAGCGGTGGGGTTATCCCACCGTG
CCCATCATAAGCTGCAGCAGCTGTCCGGTGGGGAGCAGCAGCGCGTGGCAATCGCCATCGCGCTGGCCAATCATCCGCGG
CTGCTGCTTGCCGATGAGCCAACCGGCTCGGTCGATACGAGGATGGCGGCGCAAATCCTGGAGTTGTTCCGTACCTTGAA
CCGGGAGCTAGGGCTTACGGTCGTTATCGTTACCCATGATCCGGAGCTAGCCCGCCAGGTTGACCGCGTAGTAGCGATCC
GGGACGGCAAAATCTCCTCGGAGATGCTTCGCCGCAAATCGTATATGGAGGAGCTTGCCGAGCTGGCAGAGGATGAGGCA
GAGAGCGAGTCTCATGTCGAGTATGCGGTGCTGGACAGAGCAGGCCGCCTCCAAGTTCCGCATGGCTATTTGGAGGCAGC
CGGATTTAAGGATCACCGCAAGGCGCGGGTCCAGCTGGAGAACGGAAGAATTATGCTCTCTCCGCCGGAAGAGGGTTAG

Protein sequence : 
MIHCEGLVKIYKANELEVFALQGLDLHVEAGELMAIIGNSGSGKSTLLNMLGGLDRPTAGSLTVDGKDLMKFKERDFVKY
KRESVGFVWQNNARNLIPYLTAQQNVELPILLNGRRKQQRARELLEAVGLSHRAHHKLQQLSGGEQQRVAIAIALANHPR
LLLADEPTGSVDTRMAAQILELFRTLNRELGLTVVIVTHDPELARQVDRVVAIRDGKISSEMLRRKSYMEELAELAEDEA
ESESHVEYAVLDRAGRLQVPHGYLEAAGFKDHRKARVQLENGRIMLSPPEEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-29 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-30 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pjdr2_5945 YP_003014635.1 ABC transporter NC_012469.1.7686878. Protein 1e-35 45
Pjdr2_5945 YP_003014635.1 ABC transporter CP001581.1.gene798.p Protein 4e-38 42
Pjdr2_5945 YP_003014635.1 ABC transporter NC_008702.1.4606598. Protein 2e-29 41