Gene Information

Name : Pjdr2_5637 (Pjdr2_5637)
Accession : YP_003014331.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 6469799 - 6470650 bp
Length : 852 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU33290 ferrichrome ABC transporter ATP-binding protein

DNA sequence : 
ATGATTCGTCTTGCGACTTCGAATCTGGACATTGCTTATGATGATCGACTCATCGTTCAAAATTTAAATATTGCTATCCC
TCAAGGTAAAATTACAGCCCTTGTCGGTTCTAACGGATCGGGTAAATCAACCATCCTGAAGACGATGGCACGGTTAATGC
ATCCATCTGGAGGCAGCGTTCTCTTGGACGGAAGATCGATTCACAAGCAGTCTACTAAAGAAGTGGCGAAGCAGCTTGCG
ATTTTGCCGCAGAATCCGACAGCTCCGGACGGCCTCACTGTTGCTGAGCTCGTATCGTATGGCCGCTTTCCTTATCAGAA
GGGCTTTGGGTCTTTGACAAAGGAAGACCGCGGTATTATCCAATGGGCCATTGATGCGACAGGCATGGCAGAATTCACCG
ATCGCCCGGTTGATCAACTGTCTGGCGGTCAGCGCCAGCGCGCATGGATCGCAATGGCGCTTGCGCAAGAGACGGACATT
TTATTCCTTGACGAACCAACGACCTTCCTTGATATGGCCCATCAGCTGGAGGTTCTCCATTTGCTGCAGAAGCTTAACGA
AATGAACAACCGCACGGTTGTTATGGTTGTCCATGATTTGAACCATGCCTCGCGTTACGCGCATCACATGGTTGCTATCA
AGAAGGGCACTGTCGTAGGCGAGGGAACGCCGGCTGAAGTTATGACACCGGATATTTTGCGTGAAGTATTTAATATCGAA
GCAGATATCGTTCCTGATCCGCGTACAGGCGTACCGCTTTGCCTGCCTTACGCATTGGCTGGCGAATCGGCTGCTGACAA
AGCAATGGCCGATACGAAACCTGAACGGATTTTGACAGCTGCAGGAGCATAA

Protein sequence : 
MIRLATSNLDIAYDDRLIVQNLNIAIPQGKITALVGSNGSGKSTILKTMARLMHPSGGSVLLDGRSIHKQSTKEVAKQLA
ILPQNPTAPDGLTVAELVSYGRFPYQKGFGSLTKEDRGIIQWAIDATGMAEFTDRPVDQLSGGQRQRAWIAMALAQETDI
LFLDEPTTFLDMAHQLEVLHLLQKLNEMNNRTVVMVVHDLNHASRYAHHMVAIKKGTVVGEGTPAEVMTPDILREVFNIE
ADIVPDPRTGVPLCLPYALAGESAADKAMADTKPERILTAAGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-64 49
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-64 49
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-52 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-52 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-52 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-52 48
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-59 47
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 5e-57 46
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-55 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-58 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-58 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-58 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-58 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pjdr2_5637 YP_003014331.1 ABC transporter BAC0164 Protein 3e-57 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pjdr2_5637 YP_003014331.1 ABC transporter VFG1042 Protein 3e-57 46
Pjdr2_5637 YP_003014331.1 ABC transporter VFG0925 Protein 2e-57 46