Gene Information

Name : Pjdr2_5602 (Pjdr2_5602)
Accession : YP_003014296.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Resistance
Product : CopY family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3682
EC number : -
Position : 6428043 - 6428420 bp
Length : 378 bp
Strand : -
Note : PFAM: Penicillinase repressor; KEGG: baa:BA_1629 hypothetical protein

DNA sequence : 
ATGAAAGAGATGTCGCGAATCTCCGATGCGGAGTGGGAAGTCATGAAAGTGTTATGGACGAAATCGCCGATGAGCGCAAG
CGAGGTGATTGAGGCTTTGGCAGGCGTTAACGATTGGAGCCCCAAAACCATTAGAACCCTGCTTACCCGGCTGGTTCAAA
AAGAAGTCATAACCTTGGATTCAAACAGCAAACCCTATGTCTATTCTCCATTGGTTACGGAAGATGAAACAACAAGGGCC
GAAACGGAATCCTTTTTGAAACGGCTGTACGGAAGCGTTGCTTTGAAGCCGATGCTGGTTAACTTTTTAAAATACGAGAA
ATTGTCTAAAGAAGATATTGATGAGCTGAAAAGCATTCTGGACGAAAGAAAGGAATAA

Protein sequence : 
MKEMSRISDAEWEVMKVLWTKSPMSASEVIEALAGVNDWSPKTIRTLLTRLVQKEVITLDSNSKPYVYSPLVTEDETTRA
ETESFLKRLYGSVALKPMLVNFLKYEKLSKEDIDELKSILDERKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mecI YP_005754043.1 methicillin resistance regulatory protein MecI Not tested Type-XI SCCmec Protein 7e-20 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pjdr2_5602 YP_003014296.1 CopY family transcriptional regulator AM180355.1.gene595.p Protein 2e-28 49
Pjdr2_5602 YP_003014296.1 CopY family transcriptional regulator CP001581.1.gene771.p Protein 5e-27 44
Pjdr2_5602 YP_003014296.1 CopY family transcriptional regulator FR823292.1.gene6.p01 Protein 2e-20 42