Gene Information

Name : Pjdr2_5377 (Pjdr2_5377)
Accession : YP_003014073.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 6174609 - 6175361 bp
Length : 753 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reu:Reut_B5463 short-chain dehydrogenase/reductase SDR

DNA sequence :
ATGAGTCGTCTAGCAGATAAAGTAGCTATTATTACGGGCGCGGGAAGCGGCATGGGCCGGGAGGAAGCGTTATTGTTCGC
CCGCGAAGGCGCGAAGGTGGTTGCAACCGACATTAATGAGGCAGCGGTGTTGGCTGTTGTGAAGGAAATCGAGGCGGAAG
GCGGCGTTGCAACGGCAATCGCCCACAATGTTGCGTCCGAGGAGCAGTGGATCAGCGTTATCGCAGCGGCGTTAGAGGCT
TATGGCCGAATCGATATCCTCGTCAACAATGCGGGTATTTCATTTGCGGTCGGCATGCTTGATACCACTGTCGAGCAATG
GGACAAGGTCATGAATATTAATCTTTCGAGCGTGTTTCTTGGGATGAAGCACGTTGTTCCGCATATGCAGAAAAATAACG
GCGGTTCGATTGTGAACATCTCGTCGATCGCCGGCATTACCGGCAGCCAAGGCGCTGGCGCTTATACGGCATCGAAGGGT
GCTGTCCGTATGCTGAGCAAAGCCGCTGCCGTTGATTACGGCAAGGACAATATCCGCGTCAATTCCGTGCATCCGGGCTT
TATCGAGACGCCAATGAGCAAGGAGTTCGTGGGCAACGAGCAAATGCTCGCGTGGTTCCTGTCCCAGACCGCATTGCCGC
GCGTAGGGCAAGCGGTTGAGGTTGCGAAGGCGGTCCTGTTCCTCGCGTCGGATGACGCGTCGTACCTGACTGGCATTGAG
CTGCCTGTCGACGGCGGTGTGACCGCGAAGTAG

Protein sequence :
MSRLADKVAIITGAGSGMGREEALLFAREGAKVVATDINEAAVLAVVKEIEAEGGVATAIAHNVASEEQWISVIAAALEA
YGRIDILVNNAGISFAVGMLDTTVEQWDKVMNINLSSVFLGMKHVVPHMQKNNGGSIVNISSIAGITGSQGAGAYTASKG
AVRMLSKAAAVDYGKDNIRVNSVHPGFIETPMSKEFVGNEQMLAWFLSQTALPRVGQAVEVAKAVLFLASDDASYLTGIE
LPVDGGVTAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 9e-34 43
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 8e-35 42
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 8e-34 42
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 6e-34 42
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 3e-34 42