Gene Information

Name : Pjdr2_5303 (Pjdr2_5303)
Accession : YP_003014000.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Unknown
Product : cytochrome C oxidase subunit I
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0843
EC number : 1.9.3.1
Position : 6093535 - 6095418 bp
Length : 1884 bp
Strand : -
Note : KEGG: bar:GBAA4153 cytochrome C oxidase subunit I; TIGRFAM: cytochrome C oxidase subunit I; PFAM: cytochrome C oxidase subunit I

DNA sequence :
TTGGCTCATGGACATGCGGTTAAACGTTATTCCGGCCTGATGGACTGGCTGACGACGGTTGACCACAAAAAAATCGGTAT
TTTGTATTTAATCGCCGGCGGTTTTTTCTTCCTGGTCGGCGGGTTGGAAGCACTTCTCATTCGGATTCAGCTGTGGAAAC
CGCTTAACGATTTCGTTAGCGCGGATACATATAACGAGCTGCTTACGATGCACGGTACTACAATGATCTTCCTTGCAGCG
ATGCCAGTCATCTTCGCATTGATGAACGCGATTGTACCGCTGCAGATTGGCGCACGCGACGTTGCGTACCCATTCGTAAA
CGCAATTGGTTTCTGGACTTTCTTCTTTGGCGCAGTCCTGCTGAATGTCAGCTGGTTTACTGGCGCTGCACCTGACGGCG
GCTGGACAGCTTATGCACCGCTTTCGGGAACTACATTTAACGGCGACCATGGTTTTGACTATTACGTGCTTGGCTTGCAG
ATTGCGGGTATCGGTACGCTGGTCGGCGGTATTAATTTCTTGGTAACGATTATTAATATGCGCGCTCCGGGAATGACCTT
CATGCGCATGCCGATGTTTACTTGGTCCGTATTCATTACTTCGGCACTGATCCTGTTCGCATTCCCTGCACTGACAGTTG
GCCTTGCGGCCCTCATGTTCGACCGCATATTTGACGCAAATTTCTTTGATCCTTCCGGCGGCGGTAATGCGGTTCTCTGG
GAGCATATTTTCTGGATCTTCGGGCATCCTGAGGTTTATATCCTGATCCTGCCGGCATTCGGTGTTATCTCCGAGGTTGT
CAGCACGTTCTCGCGTAAGCGGTTGTTTGGATACAGCTCAATGGTCTTCGCTACGATCCTGATCGGTTTCTTGGGCTTCA
TGGTATGGGCGCATCACATGTTCACTACTGGTCTTGGACCGGTTGCGAACGGTCTGTTCTCCATTGCAACGATGCTGATC
GCGGTACCGACAGGTATCAAAATCTTTAACTGGCTATTTACGCTGTGGGGCGGTTCGATTAAATTCAATGCAGCAAACCT
GTTTGCCGTAGGATTTATCCCAACGTTCGTAATGGGCGGTGTAACCGGTGTCATGCTGGCTGCGGCTCCTGCCGACTTCC
AGTACCATGACTCCTACTTCGTTGTAGCGCATTTCCACTACGTTATCGTTGGCGGACTTGTATTGGGTCTCTTTGCTGGT
CTTCATTACTGGTGGCCTAAGATGTTTGGCCGCATGCTGAATGAAGGTTTGGCAAAGCTGACGTTCTGGACATTCTTTAT
CGGCTTCCATCTGACATTCTTCGTACAGCATTTCCTTGGTCTGATGGGTATGCCGCGCCGGATCTGGACTTATCTGGACG
GCTTGGGCTTTAACGAACTGAACTTGATTAGTACAATCGGTGCAATGCTGATGGGTCTGGGTACGATCTTCTTCCTTCTG
AATGTTGTCATTACGGCGTTCAAACCGAAAAATGCAGCAAACGATCCTTGGGAAGATGGCCGTACGTTGGAGTGGACGAT
CCCTTCGCCGGCTCCGGAATACAACTTTAAGCAAACTCCGCTTGTTCGCGGTTATGATGCATATTGGAAAGAAAAAATGG
ATGGTCATAAAGAAATGACACCGGCTGAACCGATCGGTTCGATCCATATGCCATCCCCGTCTATTCTGCCATTGTTTATG
GCGATCGGCTTGTTTATTACAGGTCTTGGTCTCATGTACTCGCATGGCGAATGGGGTAAAATCGCTGGTATTGAAGCAGG
ATTCGTTGTAGGCGGTATCGGTCTGATCATTACATTTACATGTATGATTATCCGTTCCCTGATCGATGATCATGGCTTCC
ATATCGAACCAGAAGAACTGCAAGATAAGGGGGTTAAAGCATGA

Protein sequence :
MAHGHAVKRYSGLMDWLTTVDHKKIGILYLIAGGFFFLVGGLEALLIRIQLWKPLNDFVSADTYNELLTMHGTTMIFLAA
MPVIFALMNAIVPLQIGARDVAYPFVNAIGFWTFFFGAVLLNVSWFTGAAPDGGWTAYAPLSGTTFNGDHGFDYYVLGLQ
IAGIGTLVGGINFLVTIINMRAPGMTFMRMPMFTWSVFITSALILFAFPALTVGLAALMFDRIFDANFFDPSGGGNAVLW
EHIFWIFGHPEVYILILPAFGVISEVVSTFSRKRLFGYSSMVFATILIGFLGFMVWAHHMFTTGLGPVANGLFSIATMLI
AVPTGIKIFNWLFTLWGGSIKFNAANLFAVGFIPTFVMGGVTGVMLAAAPADFQYHDSYFVVAHFHYVIVGGLVLGLFAG
LHYWWPKMFGRMLNEGLAKLTFWTFFIGFHLTFFVQHFLGLMGMPRRIWTYLDGLGFNELNLISTIGAMLMGLGTIFFLL
NVVITAFKPKNAANDPWEDGRTLEWTIPSPAPEYNFKQTPLVRGYDAYWKEKMDGHKEMTPAEPIGSIHMPSPSILPLFM
AIGLFITGLGLMYSHGEWGKIAGIEAGFVVGGIGLIITFTCMIIRSLIDDHGFHIEPEELQDKGVKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1478 YP_001800872.1 cytochrome c oxidase subunit I Not tested Not named Protein 3e-104 50