Gene Information

Name : Pjdr2_4502 (Pjdr2_4502)
Accession : YP_003013209.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Unknown
Product : glycine betaine/L-proline ABC transporter ATPase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4175
EC number : -
Position : 5176929 - 5178128 bp
Length : 1200 bp
Strand : -
Note : KEGG: bsu:BSU02980 glycine betaine ABC transporter ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter ATPase; PFAM: ABC transporter; CBS domain containing protein; SMART: ATPase AAA; CBS domain containing protein

DNA sequence :
ATGTCCATCATCGAAGCCAAACAACTGACTAAAATATTCGGGAGTCATCCGGAGCAAGCGATGCAGTTCCTCAAGCAGGG
ATGGACGAAAGAACGAATTCTCAAAGAAACAAGAATGACAGTAGGGGTAAACCAGGCTAGCTTCACGATTGAGGCAGGCC
AGATCTTTGTCATCATGGGTTTATCCGGAAGCGGCAAGTCTACCTTAATCCGCTTGTTGAATCGATTGATTGAGCCTACG
TCCGGTCAACTCTTGTTTGAAGGGCGGGATATCGTTCAGATGAGCGCCAAAGAGCTCAGGCAATTCCGCCGCAAAAAAAT
GGGAATGGTCTTTCAGAAGTTCGCTCTGTTTCCTCACCGGACGGTTCTGCAAAACGTAGAATACGGCCTTGAGATTCAAG
GAATCGAGAAGCAATCGCGAAGGCAAATGGCCGAGCAAGCTTTGCAGCTGGTAGGCCTTGGCGGATGGGAAAACAGCTAT
CCGGATCAATTAAGCGGAGGCATGCAGCAGCGCGTCGGATTGGCCAGAGGGCTGGCCAACGATCCGGACATTCTGCTAAT
GGACGAAGCGTTTAGCGCGCTTGATCCGCTAATCCGCAAGGACATGCAGGATGAATTACTGCAGCTGCAGTCCACCATGA
AGAAGACGATTATCTTCATTACCCACGATCTTGACGAAGCCTTGCGCATCGGGGACAAGATTGCGTTAATGAAAGACGGC
GTTATCGTTCAGATTGGGACGCCTGACGAGATCTTAATCAAGCCGGCTACCCCGTACGTTGAAAAATTTATAGAGGATGT
AGATCTCTCCAAAGTGTTGACCGCTGCTCATGTCATGCGGAAGCCTGCAACGATTACTTTAGAACGCGGTCCGCGTGTTG
CCCTTCAGCTCATGAAGGAGCAAGGGGTATCGAGCTTGTATGTGACCGATAAAGGGAAGAAGCTTCTTGGCGTCATCACG
GCAGAGCTTGCTTCCGCGGCACTGAAAGAGAATTTATCGATAGGAGATATTCTGATTAAGGAAGTACCAACCATAGACTC
GGCAACACCGATTAATGAATTATTTGAGCCTATGGCGGCCTCGAGCATTCCGCTCGCGGTAACGGATGACACGAACCGGC
TGCTTGGCATCGTCATTCGCGGGGCCGTGTTTGCCGCACTTGCCGGAAACGCAATACCAGAGGCAGGTGGTGCAAGGTGA

Protein sequence :
MSIIEAKQLTKIFGSHPEQAMQFLKQGWTKERILKETRMTVGVNQASFTIEAGQIFVIMGLSGSGKSTLIRLLNRLIEPT
SGQLLFEGRDIVQMSAKELRQFRRKKMGMVFQKFALFPHRTVLQNVEYGLEIQGIEKQSRRQMAEQALQLVGLGGWENSY
PDQLSGGMQQRVGLARGLANDPDILLMDEAFSALDPLIRKDMQDELLQLQSTMKKTIIFITHDLDEALRIGDKIALMKDG
VIVQIGTPDEILIKPATPYVEKFIEDVDLSKVLTAAHVMRKPATITLERGPRVALQLMKEQGVSSLYVTDKGKKLLGVIT
AELASAALKENLSIGDILIKEVPTIDSATPINELFEPMAASSIPLAVTDDTNRLLGIVIRGAVFAALAGNAIPEAGGAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuAA YP_281521.1 glycine betaine transport ATP-binding protein Not tested Not named Protein 3e-109 58