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Name : araD (Pjdr2_4207) Accession : YP_003012920.1 Strain : Paenibacillus sp. JDR-2 Genome accession: NC_012914 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0235 EC number : - Position : 4818252 - 4818944 bp Length : 693 bp Strand : - Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source DNA sequence : ATGCTGGAGCGGTTAAAGCAAGAGGTATTGGAAGCCAACTTAGATTTGCCTAAGTATGGTCTTGTTACATTCACCTGGGG GAATGTGAGCGGTATCGATCGGGAGAGCGGCCTTGTGGTCATTAAGCCTAGCGGCGTGCCTTACGATAAGCTGAAGCTAG AGGATCTCGTTGTAGTTGATCTTGAGGGGAAGAAGGTAGAGGGCGAGCTTAAACCATCCTCGGATACTCCAACCCATCTC GTCTTATATAAAGCATTTCCGCAGATTGGCGGAATCGTGCATACGCATTCTCCGTGGGCTACAAGCTGGGCGCAAGCCGG CAAGGGGATTCCTGCGCTGGGAACCACCCATGCGGATTACTTCTACGGCGAGATTCCGGTTACCCGCGCAATGACACGCG AGGAGATCGAAAGCGCTTATGAGCTCGAGACAGGCAACGTGATTGTCGAGACGTTCAAGGATAAAGATCCAATGATGATT CCAAGCGTTCTTGTGAACAGCCATGCGCCATTTAACTGGGGCAAAGACCCGCACGAAGCCGTTCATAATGCGGTAGTGGT GGAAGAAGTGGCGAAGATGGCCCTTCATACTTATAATCTTAATCCCGACATTCAGCCGATGGATCAGGCTTTGCTTGACA AGCATTTTCTCCGGAAGCACGGGGCTAATGCCTATTACGGCCAAACCAAATAA Protein sequence : MLERLKQEVLEANLDLPKYGLVTFTWGNVSGIDRESGLVVIKPSGVPYDKLKLEDLVVVDLEGKKVEGELKPSSDTPTHL VLYKAFPQIGGIVHTHSPWATSWAQAGKGIPALGTTHADYFYGEIPVTRAMTREEIESAYELETGNVIVETFKDKDPMMI PSVLVNSHAPFNWGKDPHEAVHNAVVVEEVAKMALHTYNLNPDIQPMDQALLDKHFLRKHGANAYYGQTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 1e-51 | 58 |
