Gene Information

Name : Pjdr2_4011 (Pjdr2_4011)
Accession : YP_003012727.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Unknown
Product : ribonucleoside-diphosphate reductase subunit alpha
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0209
EC number : 1.17.4.1
Position : 4555603 - 4557657 bp
Length : 2055 bp
Strand : -
Note : KEGG: bar:GBAA1371 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; ribonucleotide reductase domain protein; ribonucleotide reductase large subu

DNA sequence :
ATGCAACGAGGAGCGGACGGCTTCTATCAATTGGATAAAGATAAAGAAGCGGTAGCCGCTTTTATGGAGGAAGTGGAAGC
GAAAAGCGTGAAATTCGGTTCCCTCCGCGAGAAGCTGGACTACCTCATCGAGAATGACTTTTACGAGAATGTATATGACC
AATATACATATGAGCAGATTGAAGCGGTGTTCACGTTGACCGAGAGCAGCGGCTTCCAGTTCGAATCGTATATGGCCATC
TCGAAATTCTACAAAGACTACGCAATGAAGACTAACGATAAATCGAAGTATCTGGAGCAATATCCGGACCGCGTAGCAAT
CGTTGCCTTGAACCTTGGCGAAGGCGACGGCGCCAAAGCGCTCCGCATCGCGGAAGCGATGATCGAGCAGCGTCTGCAGC
CGGCTACTCCAACGTTCCTGAACGCTGGCAAAAGCCGCCGCGGCGAGATGGTATCCTGCTTCCTGCTTGAGATGGACGAT
TCCTTGAACTCTATCAACTACGTTCTTGGCACCTGCATGCAGCTGTCGAAGATCGGCGGCGGCGTAGCGGTTAACCTGTC
CAAGCTGCGCGGACGCGGCGAGGCAATCAAAGGCGTAGAAGGGGCTGCCAAAGGCGTTATGCCGGTACTGAAGCTGATGG
AGGACGCATTCTCCTACGCGGACCAAATGGGTCAGCGCAAAGGCTCAGGCGCAGGGTACTACAACATTTTCGGCTGGGAT
ATCATCGAATTCCTGGATTGTAAAAAAATTAACGCCGACGAGAAAACACGGATCAAAACATTGTCGATCGGCTTGATCAT
ACCTAATAAATTCTACGAGCTGGCTGCAAAGAACGAAACGCTGTACGTCTTTGGCCCTCATTCCGTTCATAAAGCATACG
ACAAGCATCTCGACGACATGGATATGGACGTTATGTACGAAGAACTGCTTGCTAACGATAAAGTTGTGAAAAAAGCGGTC
ATGAACGCCCGCGACATGATGACAAAGATCGCTTCGATTCAGCTGGAGTCCGGCTATCCTTACATCATGAACAAATCAAA
CGCCAACCGAGTTCACGCCTTAAAGGATATCGGTCAAGTCAAGATGTCCAATCTCTGTACCGAAATTTTCCAGGTGCAAG
AGACTTCGACAATCAACGACTACGGCATGGACGATGTGATCCGCCGCGACATCAGCTGCAACCTGGCTTCGCTGAACATC
GTTAACGTTATGGAACGTAAAAAGCTTAAAGAATCCGTACACGTCGGCATCGAAGCTTTGACTACGGTCAGCGACGTATC
CGAGATCGACAACGCTCCGGGCGTACGCAAAGCAAACGAAGAGCTTCATTCCGTTGGCCTTGGCGCAATGAATCTGAACG
GCTTTTTCGCGAAGAACAAGATTGCTTACGAAAGCGACGAAGCGAAAGAGTTCGCGAGCGCATTCTTTATGATGATGAAC
TACTACTCGATCGAGAAAAGCATGGAAATCGCCAAAGAACGCGGCGCAAGCTTCAAGGATTTCGATCGTTCCGAATACGC
AAAAGGCACTTATTTCACCCGTTATATCGAAACGGACTTCCGTCCAGCATCGGATAGTGTAAAAGAACTGTTCGAAGGCA
TGGAAATCCCGTCTCCTCAGGACTGGGCTGATTTGAAAGAGAAAGTGCAAAAAAACGGCTTGTACCATGCTTACCGTCTG
GCTATCGCGCCAACGCAAAGCATCTCGTACATCCAAAACTCGACTTCGAGCGTTATGCCGATCGTAGAGCATATCGAGAC
ACGTACTTACGCGAACTCGACGACGTACTATCCGATGCCTTACCTGGCTCAAGATAACTACTTCTACTACAAATCGGCTT
ACAATATCGATCAATTCAAGCTGATTGACCTGATTTGGGAAATTCAGCAGCACGTGGATCAAGGCATCTCGACCGTCCTT
CACGTAAACAGCAACGTAACAACCCGCGAATTGGCGCGCTTCTACATCTATGCCGCTCAGAAGGGGCTCAAATCGCTCTA
CTATACGAGAACGAAGCGTCTTTCCGTTGAGGAATGCACAAGCTGCGCCGTATAA

Protein sequence :
MQRGADGFYQLDKDKEAVAAFMEEVEAKSVKFGSLREKLDYLIENDFYENVYDQYTYEQIEAVFTLTESSGFQFESYMAI
SKFYKDYAMKTNDKSKYLEQYPDRVAIVALNLGEGDGAKALRIAEAMIEQRLQPATPTFLNAGKSRRGEMVSCFLLEMDD
SLNSINYVLGTCMQLSKIGGGVAVNLSKLRGRGEAIKGVEGAAKGVMPVLKLMEDAFSYADQMGQRKGSGAGYYNIFGWD
IIEFLDCKKINADEKTRIKTLSIGLIIPNKFYELAAKNETLYVFGPHSVHKAYDKHLDDMDMDVMYEELLANDKVVKKAV
MNARDMMTKIASIQLESGYPYIMNKSNANRVHALKDIGQVKMSNLCTEIFQVQETSTINDYGMDDVIRRDISCNLASLNI
VNVMERKKLKESVHVGIEALTTVSDVSEIDNAPGVRKANEELHSVGLGAMNLNGFFAKNKIAYESDEAKEFASAFFMMMN
YYSIEKSMEIAKERGASFKDFDRSEYAKGTYFTRYIETDFRPASDSVKELFEGMEIPSPQDWADLKEKVQKNGLYHAYRL
AIAPTQSISYIQNSTSSVMPIVEHIETRTYANSTTYYPMPYLAQDNYFYYKSAYNIDQFKLIDLIWEIQQHVDQGISTVL
HVNSNVTTRELARFYIYAAQKGLKSLYYTRTKRLSVEECTSCAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 3e-139 44