Gene Information

Name : Pjdr2_3878 (Pjdr2_3878)
Accession : YP_003012594.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 4423449 - 4424177 bp
Length : 729 bp
Strand : -
Note : PFAM: alanine racemase domain protein; KEGG: bha:BH2550 hypothetical protein

DNA sequence :
ATGACGACTACAATCAAAGAAGCATTGCAGGAAAGAATCGAAGAAGTGGAGCGCCGGGTTGCGGCAGCCTGCAAGCGTAG
CGGCCGCAGCCGCGAAGAAGTGAATATTATTGCGGTAACGAAATACGTATCGCTTGAAACGGCGCAGGCTGCTCATCAGC
TTGGTCTCCGGCATCTTGGCGAGAACCGCTGGCAGGATGCCAAGGAGAAATGGGAAGCCATAAGCGACAGTGTTACGGGT
GAAAACGGCGGACAAGCTGTCTGGCATTTCATCGGTTCGCTGCAGACGAACAAAGTGAAAGACGTCATAGGCAAATTTAC
ATACATTCATTCGCTGGATCGTCTGTCTTTGGCGCAGGCGATTGACAAACGGGCTTCCCAGCTTGGTCTCACCGTTCCTT
GTTTGGTTCAGGTTAACGTATCGGGCGAACAATCCAAGCATGGTCTTGACCCGGAACAGCTGCCGGCATTTCTAGCTGAG
CTTAAGGAATTATCATCGCTGCGCATTATCGGCCTTATGACGATGGCACCTTATGAGACGGAAGCAGAAGAGACAAGGCC
TATATTTCGTTCTTTGCGCAAGCTAAGAGATGAAATGAACGAGCGTGCAATCCTCGCGGAATCGATGACGGAATTGTCTA
TGGGCATGTCAGGAGATTTCGAAGTAGCGATAGAGGAAGGCGCAACCTGGATCCGCTTGGGAACCATACTAGTAGGAAAA
GAGGGGTAA

Protein sequence :
MTTTIKEALQERIEEVERRVAAACKRSGRSREEVNIIAVTKYVSLETAQAAHQLGLRHLGENRWQDAKEKWEAISDSVTG
ENGGQAVWHFIGSLQTNKVKDVIGKFTYIHSLDRLSLAQAIDKRASQLGLTVPCLVQVNVSGEQSKHGLDPEQLPAFLAE
LKELSSLRIIGLMTMAPYETEAEETRPIFRSLRKLRDEMNERAILAESMTELSMGMSGDFEVAIEEGATWIRLGTILVGK
EG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 9e-25 42
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 9e-25 42
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 9e-25 42
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 9e-25 42