Gene Information

Name : Pjdr2_3870 (Pjdr2_3870)
Accession : YP_003012586.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Virulence
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : -
Position : 4415735 - 4416256 bp
Length : 522 bp
Strand : -
Note : TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; KEGG: bar:GBAA4032 lipoprotein signal peptidase

DNA sequence :
ATGCGTTTTTATTATTACTGGATCGCGGTAGCAGCATTTTTGCTGGACTTGGTCACCAAAAAAATCATTGCGGCTCAGCT
TGAAATCGGTGAGCAAATCAGCGTGATCGGCAATTTCTTTATTATTACCTCGTATCGGAACCGCGGCGCGGCATTTAGCA
TTTTGCAGGAACAGCGGGTGTTTTTCATCATCATCACTGTTCTTATTGTCAGTGCAATTATCTGGTATATCCAGGCCTCC
AGAAAATCAGGCAAAGTATGGCTTTTGACCGGGCTTGGCCTTGTGCTGGGCGGGGCGATCGGCAACTTCCTTGACCGTGC
GATCGCTGGAGAAGTGGTTGATTTTCTGATGTTTAATTTCGGCAGCTATACGTTCCCGATCTTTAACATAGCGGACTCCG
CTATTTGTGTAGGCGTAGCATGCATTTTAATTGATACCTTGCTGAATTCGAAGGAAGATTCGAAACGAATCGGCAACAGA
GAGGATAAGGACCCAAACGAGCATGAGCAGCAACCTGTTTAG

Protein sequence :
MRFYYYWIAVAAFLLDLVTKKIIAAQLEIGEQISVIGNFFIITSYRNRGAAFSILQEQRVFFIIITVLIVSAIIWYIQAS
RKSGKVWLLTGLGLVLGGAIGNFLDRAIAGEVVDFLMFNFGSYTFPIFNIADSAICVGVACILIDTLLNSKEDSKRIGNR
EDKDPNEHEQQPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0072 NP_763627.1 lipoprotein signal peptidase Not tested SCCpbp4 Protein 4e-09 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pjdr2_3870 YP_003012586.1 lipoprotein signal peptidase VFG2161 Protein 2e-12 44