Gene Information

Name : Pjdr2_3854 (Pjdr2_3854)
Accession : YP_003012570.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4394502 - 4395386 bp
Length : 885 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: acp:A2cp1_2841 ABC transporter

DNA sequence :
ATGATTACTTGCGAAGGACTCGTCAAAATTTACAAAAGCGACGATCTGGAGGTCGTCGCCCTGCAAGGCTTGAACCTGAA
GGTCGAAGACGGAGAGCTTATGGCTATTATCGGCAACAGCGGCAGCGGCAAATCGACCTTGCTGAATATATTGGGCGGGC
TTGACCGCCCTTCCGCCGGATCCGTCCAAGTCGGTCCATGGGATCTGCTCAAAATTTCCGAAGACGACCTGGTGAAATAC
AAACGCGAAACCGTCGGCTTTATCTGGCAAAATAATGCCCGAAACCTGCTGCCGTATCTGACAGCCCTTGAAAACGTCGA
AATGCCGATGATGCTTTCCGGCAAGGTCGACCGGGCTTATGCGAAGCAGCTGCTTGAATGGGTTGGTCTCAAGGAGAGGA
TGCATAACAAGCTGCATCAGCTCTCCGGCGGCGAGCAGCAGCGTGTAGCAATCGCCATTTCGCTGTGCAACCGTCCTAAG
CTTTTGCTTGCCGATGAACCTACCGGTTCCGTAGATACAGCAACATCGGATCTCATTATGGGGATATTCCGAAAGCTCAA
CAAGGAGCTTGGGGTAACGATTGTAATTGTTACTCACGATCTTACGCTTGCCGGCAAGGTGGACCGTGTCGTTGCCATCC
GCGACGGATTAACGAGCACGGAATTTCTGAAACGCAATCCGAATATGATTCCCGGTGGAGGTGAGGAGCAGCAGGAGGAG
AAGGGGCTTCAAGCCGTTCATGAGGCTTATGTTGTCGTGGATCGAGTCGGCCGACTGCAAGTACCAAAAGAATATTTGAG
CGCACTAAACATTAAAGACAAGGCATCGATGGAATTTGACGGCGAGCGGATTATTATTACACCGCCGAAATCACTGGGGG
GTTAG

Protein sequence :
MITCEGLVKIYKSDDLEVVALQGLNLKVEDGELMAIIGNSGSGKSTLLNILGGLDRPSAGSVQVGPWDLLKISEDDLVKY
KRETVGFIWQNNARNLLPYLTALENVEMPMMLSGKVDRAYAKQLLEWVGLKERMHNKLHQLSGGEQQRVAIAISLCNRPK
LLLADEPTGSVDTATSDLIMGIFRKLNKELGVTIVIVTHDLTLAGKVDRVVAIRDGLTSTEFLKRNPNMIPGGGEEQQEE
KGLQAVHEAYVVVDRVGRLQVPKEYLSALNIKDKASMEFDGERIIITPPKSLGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-30 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pjdr2_3854 YP_003012570.1 ABC transporter NC_012469.1.7686878. Protein 6e-33 42
Pjdr2_3854 YP_003012570.1 ABC transporter CP001581.1.gene598.p Protein 2e-37 41