Gene Information

Name : Pjdr2_3816 (Pjdr2_3816)
Accession : YP_003012532.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0842
EC number : -
Position : 4361271 - 4362290 bp
Length : 1020 bp
Strand : +
Note : PFAM: ABC transporter; KEGG: bar:GBAA2542 ABC transporter permease

DNA sequence :
ATGAGAATACGTGCGCTGGTCGTGCGCATTATGCGCCAGTTCGTCAGAGACAAACGGACTTTGGCTTTGTTATTCCTCGC
CCCTCTTCTCATTCTCGGCTTAACAAAGCTTGTATTCGACGGCCGAACCGTATCGCCCGAAATCGGATTGACCGGCCCGG
CTGGCGCGTTTGCCGAGAAACTTGAAGAGCAGAATGCCAGCATTACCGTTTTTGATTCCGTTAGCGAGGCGGAAGAGGCC
TTGAAGAACGGGAAGCTGGATGCACTCATTCAGATCAAAGAAGGCAAACCGGATATTACGCTGGAAGGCAGCGATCCTTC
GGTAAGCCGCAGCACGCAGCTTGTCATGCAGAAAGCTCTGCAGAGCAATGTTCAGGAGCTTGCTCCTACGGTTCACTATC
TGTACGGCGGGCCTGATATGGCCTCCTTCGATTCATTTGGTCCCGTACTCATCGGCTTCTTTTCTTTCTTCTTTGTCTTC
CTGCTCGCGGGAGTATCCTTCCTGCGCGAACGCACTAGCGGCACGTTGGAAAGACTGCTGGCGACACCAATCCGCAGATC
CGAGATTGTACTGGGCTACCTAGCGGGGTTTGGCATTTTCACGCTGCTCCAGGCTTCCCTGATCGCTTGGTTCTCCGTTC
AAGTGCTTGGCATGTCGATGGCCGGACACATCGTCAATATGCTGCTGATTAATCTGCTGCTGTCTCTAACGGCATTAACG
CTTGGCACCTTGCTCTCCTCGTTTGCGAGCAGTGAATTCCAAATCATTCAGTTCATTCCGATCATTATCGTGCCTCAAGC
ATTCTTCTCCGGTTTATTTAATCTGGATGCCATGAATCCGATCTTGCAGAAGCTCAGCTACATCATGCCTCTGTACTACG
GGGCGGATGCCATGCGGGGTATTATGATCCGCGGGGAAGGCATTGCCGATATCCAGCTCGATATTTACGTGCTAGCCGGC
TTGTCGATCCTGTTCGCCCTTCTCAACGTTGCGGCATTAAAGAAGCACCGCCGGATGTAG

Protein sequence :
MRIRALVVRIMRQFVRDKRTLALLFLAPLLILGLTKLVFDGRTVSPEIGLTGPAGAFAEKLEEQNASITVFDSVSEAEEA
LKNGKLDALIQIKEGKPDITLEGSDPSVSRSTQLVMQKALQSNVQELAPTVHYLYGGPDMASFDSFGPVLIGFFSFFFVF
LLAGVSFLRERTSGTLERLLATPIRRSEIVLGYLAGFGIFTLLQASLIAWFSVQVLGMSMAGHIVNMLLINLLLSLTALT
LGTLLSSFASSEFQIIQFIPIIIVPQAFFSGLFNLDAMNPILQKLSYIMPLYYGADAMRGIMIRGEGIADIQLDIYVLAG
LSILFALLNVAALKKHRRM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0095 NP_763650.1 hypothetical protein Not tested SCCpbp4 Protein 6e-31 42
SH0082 YP_251997.1 hypothetical protein Not tested SCCmec Protein 1e-29 41