Gene Information

Name : Pjdr2_3815 (Pjdr2_3815)
Accession : YP_003012531.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 4360528 - 4361274 bp
Length : 747 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bar:GBAA2541 ABC transporter ATP-binding protein

DNA sequence :
TTGACGAAATCAGCGGAAAAGCCTGCTATTGCCGTCTCACGAATCGTGAGAAAGTTCGGGGATCGAAAGGTATTGGATGA
TATTACGCTCACCGTTCCACGCGGGGAGCTGTTCGGACTTCTTGGTCCGTCAGGCTCCGGGAAAACAACGCTTATCAAGC
TCATAACCGGCATTGACCTCGCCGACGCCGGACAGGTCGAATTGTTCGGAGAGCCGATGCCCCAGCTCAAGATGCTTCAG
ACCTTCGGCTATATGGCGCAGTCCGATGCTCTCTATCAGGAGCTGACCGGCAAAGAAAACATGGCCTTTTACGGCTCCCT
CTACGGGCTTTCCGGCAAAGCTCTCGCTTCCCGGATCCAATCCGCTGCCGCGTTGGTGAATTTAACCGAACATCTGGATA
AAACGGTAACCGCTTATTCCGGCGGCATGAAACGCCGCTTGTCTCTTGCCATTGCTCTGCTGCATGAGCCTCAGCTTCTA
GTGCTAGACGAACCGACGGTTGGTATCGATCCCGTTCTCCGTCAAGCGATCTGGAATGAGCTGCGTGCCCTGACGCAGCA
AGGCGTAACGATTATCGTCACCACTCACGTAATGGACGAAGCCGAGAAATGCGACCGCTTGGGACTCATCCGCGACGGTA
AATTAATTGCGCTGGACACTCCCGAAGCTATTATCAAGCAAGCAGGAGTCCATACGATCGAAGAAGCGTTTATCACCCTT
GGAAGCCGGAAGGAGGAACAAGCATGA

Protein sequence :
MTKSAEKPAIAVSRIVRKFGDRKVLDDITLTVPRGELFGLLGPSGSGKTTLIKLITGIDLADAGQVELFGEPMPQLKMLQ
TFGYMAQSDALYQELTGKENMAFYGSLYGLSGKALASRIQSAAALVNLTEHLDKTVTAYSGGMKRRLSLAIALLHEPQLL
VLDEPTVGIDPVLRQAIWNELRALTQQGVTIIVTTHVMDEAEKCDRLGLIRDGKLIALDTPEAIIKQAGVHTIEEAFITL
GSRKEEQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2613 YP_254528.1 hypothetical protein Not tested ¥ðSh2 Protein 9e-63 57
SH0081 YP_251996.1 hypothetical protein Not tested SCCmec Protein 2e-48 55
SE0094 NP_763649.1 ABC transporter ecsA-like protein Not tested SCCpbp4 Protein 3e-59 54