Gene Information

Name : Pjdr2_3741 (Pjdr2_3741)
Accession : YP_003012457.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 4278001 - 4280055 bp
Length : 2055 bp
Strand : -
Note : KEGG: bar:GBAA3993 ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; helicase; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase

DNA sequence :
ATGACGCTGGAACAGTATTCGGTCCGGCAAATTAAAGGCGTGAGCGCTCCGAAGGAAGAAGAGCTTCACGCCTTTGGCGT
ACACACGGTCGCCGATTTGCTGGATTATTTTCCATTTCGATATGAAGATTACCGTATTCGGGAGCTTGCCGAGATCAAAG
ACGGCGAGAAGGTGACGGTTCAGGGGACGATTCGCGGGAACGGGATTTTGCAGCGGTACGGAAAAAACAAATCGCGCCTG
ACCTGCAAAATCGAGGTTGACCATATGCTGGTGACGGCTGTCTGGTTTAACCGTCATTTTCTGCAAGGACAGCTGACGCC
GGGTAGAGAAATTATGCTGACGGGCAAGTGGGAGCAGCAGCGCCTGCAGATGACCGTGTCGGAATCCGAATTTGCGGACA
AGTCTACAGGCATGGTGAAGTCAGGCACTCTTCAACCGGTCTATTCCGTAGGCGGAGGGATTACGCAAGCCTGGATGCGC
AAGACGATCAAGCAGGCGCTTCTCCAATACGGCTCCATGATTGAGGAAGTGCTGCCGCATGAGCTTGTTGAGCGCCACGG
GCTTATGGCAAGGCGTGATGCCGTGCAGCGGATTCACGATCCGGAAGAGGTTAAGGAAGGCCTGGAAGCCAGGCGGCGGA
TGGTCTATGAGGAGCTGTTTCTTTTTCAGCTGAAGCTGCAGGCTTACCGTTCTTTGACGCGGAAACGCGGGGATGGCATT
GTTCATCAGGTGAACGGGGAGACGATCCGCAACTTTGCGGCTACGCTTCCTTTCGAGCTGACGGACGGCCAGAAGAAGGT
TGTTAACGAGATTATGTCCGATATGCGCCAACCGGCGGCGATGAACCGCCTGCTGCAGGGGGATGTCGGGTCCGGCAAAA
CGGTCGTTGCGGCAATTGCGCTGTATTGCACGATCAAAGCCGGCCATCAAGGGGCTCTTATGGTGCCGACGGAGATTCTG
GCCGAGCAGCATTTGCGCTCGCTGCAGAAGCTGTTTGCGGATACGGGGATTGAGGTCGCTCTCCTGACGGGCAGCTTGAC
GGAGAAGAAGCGCCGCGATGTGCTTGCCGGGCTGCAGATGGGCATGATCGATATTCTGGTCGGCACGCATGCGCTTATTC
AGGACGATGTCTTTTTCCGCAGCCTGGGGCTTGTCGTGACGGACGAGCAGCACCGGTTCGGGGTGAATCAGCGGAGTATT
CTGCGCCGCAAAGGGATGAATCCCGACGTGCTTACGATGACGGCCACTCCAATTCCGAGGACGCTTGCCATTACGGCCTT
CGGGGACATGGATGTGTCCACGATCAAGGAGCGTCCGCACGGCCGGAAGCCGATTAAGACGTATTGGGTTAAGCATGACA
TGATGGAACGCGTTCTTGGCTTTATCCGGCGTGAGGTTGGCGAGGGACGCCAGGCGTACGTGATCTGCCCGCTGATCGAG
GAGTCGGATAAGCTGGATGTGCAAAATGCGATTGATCTGTACGTGCAGATGCAGCAGGCTTTTCCGGATTTGAAGGTCGG
GCTTCTGCACGGCCGGCTGTCGGCTTCCGAGAAGGACGAAGTGATGCGCGGGTTTGGCGCCAACGAGACGCAGCTGCTTG
TTGCGACAACGGTCGTTGAGGTTGGTGTCGACGTTCCGAATGCCACGCTTATCATCATTATGGACGCGGAGCGGTTCGGG
CTTTCGCAGCTGCATCAGCTGCGCGGGCGCGTCGGGCGCGGGGCGCATCAGTCGTTCTGCGTGCTGGTGGCCGATCCGAA
GTCGGAGAACGGACGCGAGCGAATGAAGGTGATGACGGAGACCAATGACGGCTTTGAGGTGTCGCGCCGGGATCTGGAGC
TGCGGGGACCGGGAGACTTCTTCGGGACGAAGCAAAGCGGCTTGCCGGAGTTCAAGATCGCTGATATGGCGGCGGAATAC
GAGATGCTGGAGCTTGCCCGCGATGATGCGGCGGAGCTTACCGGACGGGATGATTTCTGGACGAATCCGTTGTTCGAACG
GATGCGTGTCCAACTGCTGAAGGATCAAATTTTTCAAGGGGAACAGCTCGACTAA

Protein sequence :
MTLEQYSVRQIKGVSAPKEEELHAFGVHTVADLLDYFPFRYEDYRIRELAEIKDGEKVTVQGTIRGNGILQRYGKNKSRL
TCKIEVDHMLVTAVWFNRHFLQGQLTPGREIMLTGKWEQQRLQMTVSESEFADKSTGMVKSGTLQPVYSVGGGITQAWMR
KTIKQALLQYGSMIEEVLPHELVERHGLMARRDAVQRIHDPEEVKEGLEARRRMVYEELFLFQLKLQAYRSLTRKRGDGI
VHQVNGETIRNFAATLPFELTDGQKKVVNEIMSDMRQPAAMNRLLQGDVGSGKTVVAAIALYCTIKAGHQGALMVPTEIL
AEQHLRSLQKLFADTGIEVALLTGSLTEKKRRDVLAGLQMGMIDILVGTHALIQDDVFFRSLGLVVTDEQHRFGVNQRSI
LRRKGMNPDVLTMTATPIPRTLAITAFGDMDVSTIKERPHGRKPIKTYWVKHDMMERVLGFIRREVGEGRQAYVICPLIE
ESDKLDVQNAIDLYVQMQQAFPDLKVGLLHGRLSASEKDEVMRGFGANETQLLVATTVVEVGVDVPNATLIIIMDAERFG
LSQLHQLRGRVGRGAHQSFCVLVADPKSENGRERMKVMTETNDGFEVSRRDLELRGPGDFFGTKQSGLPEFKIADMAAEY
EMLELARDDAAELTGRDDFWTNPLFERMRVQLLKDQIFQGEQLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 2e-97 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pjdr2_3741 YP_003012457.1 ATP-dependent DNA helicase RecG BAC0356 Protein 1e-91 42