Gene Information

Name : Pjdr2_3553 (Pjdr2_3553)
Accession : YP_003012272.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Unknown
Product : transposase IS4 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3666
EC number : -
Position : 4032396 - 4033946 bp
Length : 1551 bp
Strand : +
Note : PFAM: transposase IS4 family protein; KEGG: bha:BH1427 transposase (08)

DNA sequence :
ATGTACAAAGAATATACCATGGATCAACTGTCCTTGCCAATGGACTTGCAAGAAGATATCCCCGAAAATCATCTCGTACG
CGTCATCAACGATGCGGTCAATCGCTTAGATATGAAGCTCTTTACCAAAGCTTATCCCGGAGGTGGCCGGGACAGCTACC
ACCCCAAAATGCTCATGAAAGTCGTTATCTATGCGTACACACAGCGCATCTACTCCTCTCGCCAAATCGCCAAAGCGGTA
CGCGAAAACATCATGTTTATGTGGTTAGCCGCTAGACAACGCCCAGATTTCCGCACCATTAACCGTTTCCGCTCTGAGCG
GATGAAAGATGTGCTAGAGACCGTCTTCACGGCTGTTCTTCAGTTTCTGAAGGAAGAGAACTTCATCAAGCTGGAGCACT
ACTTCTTGGATGGAACGAAAATCGAGGCGAATGCCAATCGTTACACGTTTGTCTGGGGTAAAGCTGTCGTCAAACAGAAG
ATGAAGCTGCAAGAGAAAGTGCAGGCTTTGTTCGCTGCCATTGAAGAGGCAGAGAAACAGGAAGATCAGGCGCTGAATAA
CGTGGACCTTCCTGAGCTCGGAGAGGCTTCCGCTATCACGAGCGAAAAGCTGGAGCAAGCGGTTCAGCGACTAGAAAACA
AACTTCAAGAAAAACCGAAGGACAAACCGTTAAAGAAAACTGTGCGCCTTGTTCGGAAAGATCTTCTTCCTCGCCTGCAA
AAATATGAAGGGCAGCAAGAAACACTCGGTAGCCGAAACAGCTTCAGCAAAACCGACACCGATGCGACGTTCATGCGCAT
AAAGGAAGACCACATGCGCAATGGTCAGTTGAAGCCGGGATATAACGTGCAGATTGGAACGGAAGATCAATTTATTCTCA
GTTACAGTATTCATCAACGTCCAACGGATACGCGTTGTCTCAAGCCACACCTGGATAAAGTGAAAGCCTCACTTGGTCAA
TTGCCGGGAACCATCATCACAGATGCAGGTTATGGCAGCGAAGAAAATTATGCTTACCTAGAATCTGAAGAACAACGAGC
ACTTGTAAAATACAATACTTATCCCAAAGAAAACACCAAAGCATGGAAGCAAGATATAAGCAAGTTCGAGAACTGGTTGT
ATGACGAGAATGAAGATTCATGGACATGTGCAGCAGGACAGAAACTGCTATTTCGCTATGAAAGCAAAAGCTTAACCGAG
AGCGGATACGAGATCGTTACTCGCAACTATCGCAGTATTTCCTGCGAGGGCTGTCCGCTAAAGGACAGGTGTACAAAGGC
ACAAGGAGATCGAGAAATAAAAGTTAGCATGGAATATCTTCGAGTCAAGCAGCAGGCGAGAGCGCAACTAAAGAGCGAGG
ATGGACATGCCTTGTCAGTTCGACGGATGCATGAACCGGAAAGTGTGTTTGGCCAAATAAAGAATAACCGGGGATTCCGC
AGATTTCTGCTTCGAGGCTTGCCGAAAGTTAGCCTGGAGGTCGGGTGGCTTTCGCTTGCCCATAACTTGCTGAAGAAAGC
AGCAAGAGCAAAAATATCGCTGCAAGGGTAA

Protein sequence :
MYKEYTMDQLSLPMDLQEDIPENHLVRVINDAVNRLDMKLFTKAYPGGGRDSYHPKMLMKVVIYAYTQRIYSSRQIAKAV
RENIMFMWLAARQRPDFRTINRFRSERMKDVLETVFTAVLQFLKEENFIKLEHYFLDGTKIEANANRYTFVWGKAVVKQK
MKLQEKVQALFAAIEEAEKQEDQALNNVDLPELGEASAITSEKLEQAVQRLENKLQEKPKDKPLKKTVRLVRKDLLPRLQ
KYEGQQETLGSRNSFSKTDTDATFMRIKEDHMRNGQLKPGYNVQIGTEDQFILSYSIHQRPTDTRCLKPHLDKVKASLGQ
LPGTIITDAGYGSEENYAYLESEEQRALVKYNTYPKENTKAWKQDISKFENWLYDENEDSWTCAAGQKLLFRYESKSLTE
SGYEIVTRNYRSISCEGCPLKDRCTKAQGDREIKVSMEYLRVKQQARAQLKSEDGHALSVRRMHEPESVFGQIKNNRGFR
RFLLRGLPKVSLEVGWLSLAHNLLKKAARAKISLQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp YP_254534.1 IS1272 transposase Not tested ¥ðSh2 Protein 3e-76 41