Gene Information

Name : Pjdr2_3353 (Pjdr2_3353)
Accession : YP_003012074.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3830558 - 3831364 bp
Length : 807 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH1587 iron(III) dicitrate transporter (permease)

DNA sequence : 
ATGATCTCGGTTCAACAATTGAGCAAGAAGGTTAACGGCCGTTCTGTTCTGGAGAACCTCTCGTTTAATCTGGAGCCAGG
CCGAATTCATTGCATAATCGGGCCAAACGGCGTAGGGAAGTCAACGCTATTGCAGCTGCTATCCGGCGTGACAAAGCCTT
CTTCGGGTGAAGTCAGCTTATCTGGCGTTCATCTGTCGAATTATTCCCGCAAAGCTCTCGCAAGACGTTTGGCAGTACTG
CAGCAAGGCGGATTGCCGCCTGCGGGCTTTACCGTCCGTCAAGTGGTTGAGATGGGCCGTTTTCCTTATCAAAATTGGTT
TGGCGATGAACGGGAGGATCATTCGGCGCTGATCGATTTTACGCTTGAATCGATGGGTTTAACGCCTTTGTCGAACCGGC
CGCTTGATCAGCTAAGCGGCGGTGAGCGTCAGCGGGTAGCTCTAGCTAAGGTGATGGTGCAGGAGCCGGAGGTTATTTTG
CTGGATGAGCCAACGACCTATCTGGATATCGGTTATCAAGTACAGCTGCTGGATACCGTGCGGCAGTGGCAGCAAGAGCG
CAACTTGACCGTTGTAGCCGTCCTGCATGATCTGAATTTGGCATCCCTGTATTGTGATCGGATACTCGTCCTGCATAAAG
GCGGAATAGCGGCAATGGGTTCTCCTGCGGAGGTGCTTAGCGTTGATCTAATCCGGGAGGTTTATCAGGCGGAAGCATCG
ATCGTGAAGCATCCGTTGACCGGTACGCCGCAAATTTTGTTGCAGCCGAAACAACAAGAAGCCGGCAGATTGATAGAAAT
GACATAG

Protein sequence : 
MISVQQLSKKVNGRSVLENLSFNLEPGRIHCIIGPNGVGKSTLLQLLSGVTKPSSGEVSLSGVHLSNYSRKALARRLAVL
QQGGLPPAGFTVRQVVEMGRFPYQNWFGDEREDHSALIDFTLESMGLTPLSNRPLDQLSGGERQRVALAKVMVQEPEVIL
LDEPTTYLDIGYQVQLLDTVRQWQQERNLTVVAVLHDLNLASLYCDRILVLHKGGIAAMGSPAEVLSVDLIREVYQAEAS
IVKHPLTGTPQILLQPKQQEAGRLIEMT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-38 43
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-38 43
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-38 43
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-38 43
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-44 42
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 5e-39 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pjdr2_3353 YP_003012074.1 ABC transporter BAC0164 Protein 3e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pjdr2_3353 YP_003012074.1 ABC transporter VFG1042 Protein 3e-39 41
Pjdr2_3353 YP_003012074.1 ABC transporter VFG0925 Protein 6e-42 41