Gene Information

Name : Pjdr2_3220 (Pjdr2_3220)
Accession : YP_003011947.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Resistance
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3684827 - 3685492 bp
Length : 666 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: baa:BA_0137 REC, CheY-homologous receiver domain

DNA sequence : 
ATGGACATACGAATTCTACTTGTCGAGGATGACGAACATATAGGCAATACCGTCAAAACCTTTTTAATTGAAGCCGGATA
CAAAGTAGATGTCTGCATAAACGGTATCGAAGCATACACAAACTTTTACAATCATACTTACCAGCTGGTCATTCTCGACA
TCATGCTGCCCGGTATGAGTGGTCATGAGCTATTACGGGAGTTTCGCAAGCGGAATAATACGCCCATACTGATGATGACC
GCTCTTTCGGACGATGAGAATCAAATCAAGGCATTTGACGCGGAAGCGGACGATTATGTGACAAAGCCATTCAAGATTCA
GCTTCTGCTAAAACGTGTGGGAGCCTTGCTCAGGCGAAGCGGCGCGTTGGCAAAAGAAATACGCTGCAGCAACCTGACGA
TTCTGCCGGATGATTTCAGAGCGCTTTACGATGGCGTAGAGCTGCCCCTGACACTTAAAGAATTTGAGATCCTTATGCTA
TTGGTACAGAACAAGGGCAGGACGTTGTCTCATGAAATCATCTTATCGCGCGTGTGGGGGTACGATTTTGACGGCGACGG
AAGCACCGTGCATACGCATATCAAAAATTTGCGGGCAAAGCTGCCAGAAAATATGATCAAGACGGCTCGCGGCGTAGGTT
ACCGATTGGAGGAAGACACGCTTTGA

Protein sequence : 
MDIRILLVEDDEHIGNTVKTFLIEAGYKVDVCINGIEAYTNFYNHTYQLVILDIMLPGMSGHELLREFRKRNNTPILMMT
ALSDDENQIKAFDAEADDYVTKPFKIQLLLKRVGALLRRSGALAKEIRCSNLTILPDDFRALYDGVELPLTLKEFEILML
LVQNKGRTLSHEIILSRVWGYDFDGDGSTVHTHIKNLRAKLPENMIKTARGVGYRLEEDTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 6e-87 83
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 2e-84 82

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pjdr2_3220 YP_003011947.1 winged helix family two component transcriptional regulator AF310956.2.orf0.gene Protein 2e-87 83
Pjdr2_3220 YP_003011947.1 winged helix family two component transcriptional regulator U35369.1.gene1.p01 Protein 6e-85 82
Pjdr2_3220 YP_003011947.1 winged helix family two component transcriptional regulator AE016830.1.gene2255. Protein 6e-85 82
Pjdr2_3220 YP_003011947.1 winged helix family two component transcriptional regulator HE999704.1.gene1202. Protein 3e-47 46