Gene Information

Name : Pjdr2_3147 (Pjdr2_3147)
Accession : YP_003011875.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : R : General function prediction only
COG ID : COG4221
EC number : -
Position : 3604239 - 3604979 bp
Length : 741 bp
Strand : +
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: rle:RL2941 short-chain dehydrogenase/oxidoreductase

DNA sequence :
ATGGAAAATATAAAAGATAAAGTGGTCATTATTACCGGAGCTTCAAGCGGAATAGGGGAGGCTACGGCGAAGCTTCTAGC
TGATCAAGGCGCGAAGGTGGTGTTAGCGGCAAGAAGAGAGGATCGTCTTCAATCAGTCGTTAATGACATTAAGCAAAATG
GAGGAGAGGCGGTATCCGTTAGAGCGGATGTCGTATCTTCCGAAGACATGAAGAGATTAGCTCAATTCGCCTTGGACAAG
TACGGCCGTATCGATGTCTTGGTAAACAACGCAGGCATTATGCCAAGCTCCAGAATGAACGAGCTTCGGGTAGAAGAGTG
GGAGCAAATGATTGATGTGAATATCAAAGGCGTATTGTACGGGATCGCTGCGGTATTGCCGGTTATGCGCGAGCAGAAGT
CCGGTCATGTCATTAATTTATCCTCGACCGCCGGTTATCATGTATCCGCCACTTCCGCCGTATATGCGGCAACTAAGTTT
GCCGTCCGGGCAATCTCGGAAGGGCTGCGCCTTGAGGAGTCCGCCGATTCGGGTATCCGATCTACCGTCGTTTCCCCAGG
TTTGACGAACACGGAGCTCTTCAGCAGCATCACAAGTCCGGAGGTGCAAGCAATGGCCAGTCAAATCGGCGGAATGGGAA
TTAATCCATCCAGCATTGCGAGAGCTATCGCATTTGCGATTAATGAACCTGACGATGCGCTTGTGAGCGAAATTATGGTA
AGACCAACCGCGTTAGCTTAA

Protein sequence :
MENIKDKVVIITGASSGIGEATAKLLADQGAKVVLAARREDRLQSVVNDIKQNGGEAVSVRADVVSSEDMKRLAQFALDK
YGRIDVLVNNAGIMPSSRMNELRVEEWEQMIDVNIKGVLYGIAAVLPVMREQKSGHVINLSSTAGYHVSATSAVYAATKF
AVRAISEGLRLEESADSGIRSTVVSPGLTNTELFSSITSPEVQAMASQIGGMGINPSSIARAIAFAINEPDDALVSEIMV
RPTALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC20627.1 hypothetical protein Not tested Internalin Protein 1e-54 53
adh CAI59964.1 short-chain dehydrogenase Not tested LIPI-2 Protein 1e-52 50