Gene Information

Name : Pjdr2_2874 (Pjdr2_2874)
Accession : YP_003011609.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 3307299 - 3308027 bp
Length : 729 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU27430 glutamine ABC transporter ATP-binding protein

DNA sequence :
TTGATTGAATTTCAACAAGTGGAGAAGCATTATGGCGATTTTCATGTGCTAAAAGGCATCGATCTTCGAGTCGCGCAAGG
TGAGGTGGTCGTTGTGGTCGGGCCTTCCGGCTCGGGAAAAAGTACCCTTCTGCGCTGCGTCAACCGGTTGGAAGCGATCA
CGAGCGGTCGTCTGACCGTCAATGATGTTGACGTCGCCGATAAGAAAACCGACATCAACAAGCTGCGGCGGGAAATCGGT
ATGGTGTTCCAGCACTTCAATCTTTATCCGCATATGAAAGTGATCGACAATATTACGCTCGCTCCGATGAAGTCGCTCGG
CGTGCCAAAGCCGCATGCGGTGGAAACGGCCAAGATGTATTTGGAGAAAGTCGGCATCGAGGACAAAGCGGGCGCGTTTC
CTTCGCAGCTGTCCGGGGGACAGCAACAGCGCGTGGCAATCGCCAGGGCACTCGCCATGAAGCCAAAGATTATGCTTTTC
GATGAGCCTACCTCCGCGCTTGATCCGGAGATGGTAGGCGAGGTTCTGGACGTCATGAAGACCTTGGCGCAAGAAGGGAT
GACGATGGTCGTCGTTACGCACGAGATGGGTTTCGCGCGGGAAGTGGCGGACCGCGTTGTCTTTATGGACAAAGGGCAAA
TCGTTGAAATCTCTCCGCCGGAGGAATTCTTCGAGCAGCCTCGGGAAGAACGGGCGCGTTTGTTCCTCAATCGCGTTCTG
CGCCACTAA

Protein sequence :
MIEFQQVEKHYGDFHVLKGIDLRVAQGEVVVVVGPSGSGKSTLLRCVNRLEAITSGRLTVNDVDVADKKTDINKLRREIG
MVFQHFNLYPHMKVIDNITLAPMKSLGVPKPHAVETAKMYLEKVGIEDKAGAFPSQLSGGQQQRVAIARALAMKPKIMLF
DEPTSALDPEMVGEVLDVMKTLAQEGMTMVVVTHEMGFAREVADRVVFMDKGQIVEISPPEEFFEQPREERARLFLNRVL
RH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-25 43
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-25 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-25 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-25 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-25 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pjdr2_2874 YP_003011609.1 ABC transporter NC_012469.1.7686878. Protein 3e-29 43