Gene Information

Name : Pjdr2_1717 (Pjdr2_1717)
Accession : YP_003010466.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 2020327 - 2021136 bp
Length : 810 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: scl:sce4768 ABC-type transporter ATP-binding protein

DNA sequence : 
ATGCCGGCATTAGAAAAGCTGCGATTCGAGAATGTGGCAAAAAGCTTTATTGTGCGCGATCCGAAACAAAAAGGGGCGAC
GCAGCAGTTTACGGCGGTTAAGGATTTAAGCTTTACCGTCAAGGAAGGCGAGTTTATTACCTTGGTAGGACCAAGCGGCT
GCGGAAAATCAACCCTGCTTGACCTCATTAGCGGTCTGTCGCTTCCATCTAGCGGACGTATTTACATGGACGGGAAGGAA
ATTACCGGTCCCGGCCTCGACAGAGGGATTGTTTTTCAGCAATATGCTTTATTTCCTTGGAAGACGGCAAGAGGGAATAT
CGAGTTCGGACTGGAGGCAAAAGGCATACCGAAGCATGAGCGGAGGGAATTAGCGGAGCATTTTCTAGCGTTAGTAGGAC
TAAGCGCCTTCGCTAACCGGTATCCCCATGAATTGTCAGGAGGCATGAAGCAGCGAGTAGCGATTGCCAGAAGCCTTGCC
TTTAACCCGGATGTTCTGTTAATGGATGAACCGTTTGCGGCGCTTGATGCGCAGACGAGGGAAACCTTGCAAAGCGAGCT
GCTTCGGATCTGGCAGAAAACGAAAAAGACGATTATTTTCATCACGCATGGCATTGACGAAGCGGTATACCTGGGAGAAC
GCGTTGTTGTTCTGACTCCCGGTCCGGGTACGGTGAAGAAAATCGTCGATATCCCCTTGAAGCACCGGCTGGATGATGCG
GATATCCGCTCCAATCCGGAGTTTGTAAAGGCGCGGCATGAGGTATGGAGCTTATTGCATGAGCTGGAGTACCAGGGCGC
GTATATTTAA

Protein sequence : 
MPALEKLRFENVAKSFIVRDPKQKGATQQFTAVKDLSFTVKEGEFITLVGPSGCGKSTLLDLISGLSLPSSGRIYMDGKE
ITGPGLDRGIVFQQYALFPWKTARGNIEFGLEAKGIPKHERRELAEHFLALVGLSAFANRYPHELSGGMKQRVAIARSLA
FNPDVLLMDEPFAALDAQTRETLQSELLRIWQKTKKTIIFITHGIDEAVYLGERVVVLTPGPGTVKKIVDIPLKHRLDDA
DIRSNPEFVKARHEVWSLLHELEYQGAYI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 5e-42 43
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-30 42
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pjdr2_1717 YP_003010466.1 ABC transporter NC_012469.1.7686878. Protein 7e-31 41