Gene Information

Name : Pjdr2_1254 (Pjdr2_1254)
Accession : YP_003010017.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 1497938 - 1499956 bp
Length : 2019 bp
Strand : +
Note : TIGRFAM: transketolase; PFAM: transketolase central region; transketolase; KEGG: bha:BH2352 transketolase

DNA sequence :
ATGACAGTTACACAAAAATCGATTGAACAGCTGTCGATCGACACGATTCGTACGCTGGCAATCGACTCCATCGAGAAAGC
AAATTCCGGACATCCAGGGATGCCAATGGGCGCAGCTCCAATGGGCTACCAACTGTTCGCGAAAAACATGACGCATAATC
CGTCGAACCCGACTTGGATTAACCGCGACCGCTTCGTTCTGTCCGCAGGACACGGTTCGATGCTGCTTTACAGCTTGCTT
CACCTGAGCGGTTACGATCTTCCTCTGGAAGAGCTGCAAAACTTCCGCCAATGGGGTTCCCTGACTCCGGGTCACCCGGA
ATTCGGCCACACGGCTGGCGTTGACGCAACAACCGGTCCGCTTGGACAGGGCGTTGCTATGGCTGTAGGCATGGCAATGG
CAGAAGCTCATTTGGCAGCTACTTACAATAAAGAAGGCTATGATGTTGTTAATCACTTCACATACTCCATTTGCGGCGAC
GGCGACTTGATGGAAGGCATCTCCCATGAAGCGGCTTCCTTCGCAGGTCACTTGAAGCTTGGCAAATTGGTTGTTCTGTA
TGATTCGAACGATATCTCCCTTGACGGAGCTCTTGACCTGTCGTACTCCGAAAGCGTTCAAAAACGTTTCGAAGGCTACG
GCTGGCAAGTTCTTCGCGTTGAAGACGGCAACGACTTGAACGCTTTGACTAAAGCAATCGCTGAAGCGCAAGCGGAAACA
GGCAAACCGACTTTGATCGAAGTTAAAACCGTTATCGGTTACGGCAGCCCTAACAAAGGCGGTAAAGGCGGACATGCTGG
TCCTCACGGTTCCCCTCTGGGTGCTGACGAGACTAAGCTGACTAAACAATTCTACGGCTGGAACGAAGAGGATAAATTCC
ATGTTCCGGACGAAGTTCGCGCGCACTTTGCTGAAGTGAAGCAGAACGGCGAGAAAGCAAACGCTGCTTGGAACGAGCAA
TTCGAAGCTTACAAAAAAGCATACCCAGAGCTTGCAGCTCAATTCGAGCTGGCTACTTCCGGTCAATTGCCTGAAGGCTG
GGATAAAGACCTGCCTAAATACACAACGGAAGACAAGCCGTTGTCGACTCGCGTAGCTTCGGGTAACGCTCTGAACGGTC
TTGTTCACAACGTGCCTGCTCTGGCTGGCGGTTCCGCTGACCTTGAGAGCTCGACAATGACTCACCTGAAAGGTTTGGCA
CAATTCAAACCAGGCAGCTACGACGGCCGCAACATCTACTACGGTGTTCGCGAGTTCGGTATGGCTGCAGCTATGAACGG
CATGAGCCTGCATGGCGGCATGAAAGTATTCGGCGGTACGTTCTTCGTATTTACCGACTACCTGCGTCCGGCAATCCGTC
TGGCGGCTATCATGAAACAACCGGTTACTTACGTTCTGACGCATGACTCGATCGCCGTTGGCGAAGACGGTCCTACGCAT
GAACCAATCGAGCAACTGGCTTCGATCCGCATCATTCCCGACCTGACAGTTATTCGTCCTGCTGATGCTAACGAAACTTC
CGCTGCTTGGGCTTATGCGGTTGAGAACCAAAGCAATCCGGTAGCGCTTGTTCTGACTCGTCAAAACCTGCCGATCCTGG
AAGGCACTGTGTCCGGCTCCCGTGAGAACATCAAGCGTGGTGCTTATGTGGTATCCGATGCAGCAAACGGTGCTCCGCAA
GCTCAAATTATCGCTACTGGCTCCGAGGTGCAACTGGCGGTTGCTGCTCAAAAAGCGCTTGCCGAAGAAGGCATTCAAGT
TCGCGTAATCAGCATGCCAAGCTGGGATCTGTTCGACAAGCAAGATCAAGCGTACAAAGATTCCGTTATCCTCCCTGAAG
TTAAAGCTCGCGTAGCTGTTGAGATGGCTCATCCATTCGGTTGGGATCGTTTCGTTGGCGACAAAGGCGTGGTTATCGGC
ATCGACCGCTTTGGCGCATCCGCACCTGGCGACCGCGTGATCAAAGAATACGGCTTCACTGTTGAGAACGTAGTAAGCAA
TGTGAAATCGGTTCTGTAA

Protein sequence :
MTVTQKSIEQLSIDTIRTLAIDSIEKANSGHPGMPMGAAPMGYQLFAKNMTHNPSNPTWINRDRFVLSAGHGSMLLYSLL
HLSGYDLPLEELQNFRQWGSLTPGHPEFGHTAGVDATTGPLGQGVAMAVGMAMAEAHLAATYNKEGYDVVNHFTYSICGD
GDLMEGISHEAASFAGHLKLGKLVVLYDSNDISLDGALDLSYSESVQKRFEGYGWQVLRVEDGNDLNALTKAIAEAQAET
GKPTLIEVKTVIGYGSPNKGGKGGHAGPHGSPLGADETKLTKQFYGWNEEDKFHVPDEVRAHFAEVKQNGEKANAAWNEQ
FEAYKKAYPELAAQFELATSGQLPEGWDKDLPKYTTEDKPLSTRVASGNALNGLVHNVPALAGGSADLESSTMTHLKGLA
QFKPGSYDGRNIYYGVREFGMAAAMNGMSLHGGMKVFGGTFFVFTDYLRPAIRLAAIMKQPVTYVLTHDSIAVGEDGPTH
EPIEQLASIRIIPDLTVIRPADANETSAAWAYAVENQSNPVALVLTRQNLPILEGTVSGSRENIKRGAYVVSDAANGAPQ
AQIIATGSEVQLAVAAQKALAEEGIQVRVISMPSWDLFDKQDQAYKDSVILPEVKARVAVEMAHPFGWDRFVGDKGVVIG
IDRFGASAPGDRVIKEYGFTVENVVSNVKSVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 7e-138 49
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 7e-132 47