Gene Information

Name : Pjdr2_1068 (Pjdr2_1068)
Accession : YP_003009834.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 1279349 - 1280770 bp
Length : 1422 bp
Strand : +
Note : KEGG: bar:GBAA4843 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: pyruvate kinase barrel; pyruvate kinase alpha/beta

DNA sequence : 
ATGCGCAAGACAAAAATTGTTTGCACCATGGGACCGGCATGCGAATCGACGGAAGTATTAATTGACATGATTAATGCGGG
GATGAACGTTGCCCGTTTGAATATGGCACACGGAGAGCTGGAGGATCATGCGGCACGTATTGCGCGTATTCGCGAAGCTG
CTGCGGCTACGAACAGTATTGTTGCGATTTTGCTTGATATTAAAGGTCCGGAAGTGCGGATCGGCAAGCTGGAGGAAGCT
TCTTACCTGCTGAAGGTTGGAGAGAAGCTGACGCTGACTACGGAAGAGATTATCGGTAACGGCGAGCGCATTCACGTGAA
CTATGCGGAGCTGCCTCTGGTCGTGAACCCTGGCAATAAAATTTTGCTCGACGATGGCCTTATCGAAATGGAAGTTGTAT
CGGTTAACGGAACGGAAATCGAGTGCGTCATTCTGAATGGCGGCGTAATTAAAGCGAGAAAAGGCGTCAACCTGCCGGGT
ATCCGCACAACGCTTCCTGGCGTAACGGAACGCGATATCCGCCATATCCAGTTCGGCATCGAACAGCAAATTGATATTAT
CGCTCCTTCCTTTGTGAGAAGAGCGGAAGATATTTTGCAAATCCGCGAGCTTCTTCATGACGGCGGCGCAGGGCATATCC
AAATCATCTCGAAGATCGAGAATGAAGAAGGCGTTAATAACCTCGATTCGATCATCGAAGCTTCGGACGGCATCATGGTT
GCCCGCGGCGACCTTGGCGTAGAAGTACCGGCTTGGGACGTACCGATGATTCAGCGCGAAATGATCTCGAAATGTAACAC
AGCGGGTAAAGTAGTCATTGTTGCGACGCAAATGCTTGATTCGATGCAGGTTAACCCTCGCCCATCCCGCGCGGAAGTAA
GCGACGTTGCGAACGCCGTCCTTCAAGGCACGGATGCGATTATGCTTTCGGGCGAGACGGCTGCCGGCAAATATCCGGTA
GAATCGGTCAGCATGATGGCTTCCATTGCGGTGAAGGCGGAGTCCATGATGGATTACTTCGATGAGTTCCAACAGCGCAG
AGGCGCTCAACCAACAACGATTACGGAAGTAATTAGCCAAGCGGTTGTAAGCTCGTCTTTGGAGCTGAACGCAAAAGCTA
TCGTAACGCCAACGGAGAGTGGGTTCACAGCCCGTATGGTATCGAAATACCGTCCAAAATCGCCAATTATCGCGGTTGCT
TCGGATGAGAAGGTTCTGCCTCGCCTGGCTGTTATGTGGGGAGTTATCCCGGTGAAAGGTGGCCGACCTAACTCGACGGA
CGATATTTTTGAATCGGCATTAACAAACGGCGGCAGCACGGGTCTCCTGGAGAAAGGCGACTACGTTGTTATTACAGCGG
GTACGCCAACAGGCAAAGCCGGCGCTACCAATCTTGTGAAGATCGCGCAATACGGCCTATAA

Protein sequence : 
MRKTKIVCTMGPACESTEVLIDMINAGMNVARLNMAHGELEDHAARIARIREAAAATNSIVAILLDIKGPEVRIGKLEEA
SYLLKVGEKLTLTTEEIIGNGERIHVNYAELPLVVNPGNKILLDDGLIEMEVVSVNGTEIECVILNGGVIKARKGVNLPG
IRTTLPGVTERDIRHIQFGIEQQIDIIAPSFVRRAEDILQIRELLHDGGAGHIQIISKIENEEGVNNLDSIIEASDGIMV
ARGDLGVEVPAWDVPMIQREMISKCNTAGKVVIVATQMLDSMQVNPRPSRAEVSDVANAVLQGTDAIMLSGETAAGKYPV
ESVSMMASIAVKAESMMDYFDEFQQRRGAQPTTITEVISQAVVSSSLELNAKAIVTPTESGFTARMVSKYRPKSPIIAVA
SDEKVLPRLAVMWGVIPVKGGRPNSTDDIFESALTNGGSTGLLEKGDYVVITAGTPTGKAGATNLVKIAQYGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 6e-91 48
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 6e-91 48
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 6e-91 48
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-90 48
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 3e-50 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pjdr2_1068 YP_003009834.1 pyruvate kinase VFG0479 Protein 2e-91 48